Protein–RNA interactions for Protein: Q9D287

Bcas2, Pre-mRNA-splicing factor SPF27, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bcas2Q9D287 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.04■□□□□ -0
Bcas2Q9D287 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Bcas2Q9D287 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Bcas2Q9D287 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Bcas2Q9D287 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Bcas2Q9D287 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Bcas2Q9D287 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC15.04■□□□□ -0
Bcas2Q9D287 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.04■□□□□ -0
Bcas2Q9D287 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Bcas2Q9D287 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Bcas2Q9D287 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Bcas2Q9D287 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Bcas2Q9D287 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.04■□□□□ -0
Bcas2Q9D287 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Bcas2Q9D287 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Bcas2Q9D287 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Bcas2Q9D287 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Bcas2Q9D287 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Bcas2Q9D287 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Bcas2Q9D287 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.03■□□□□ -0
Bcas2Q9D287 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Bcas2Q9D287 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Bcas2Q9D287 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.03■□□□□ -0
Bcas2Q9D287 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
Bcas2Q9D287 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Bcas2Q9D287 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.03■□□□□ -0
Bcas2Q9D287 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Bcas2Q9D287 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.03■□□□□ -0
Bcas2Q9D287 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Bcas2Q9D287 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Bcas2Q9D287 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Bcas2Q9D287 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
Bcas2Q9D287 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Bcas2Q9D287 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15.03■□□□□ -0
Bcas2Q9D287 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Bcas2Q9D287 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC15.03■□□□□ -0
Bcas2Q9D287 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.03■□□□□ -0
Bcas2Q9D287 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Bcas2Q9D287 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Bcas2Q9D287 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.02■□□□□ -0
Bcas2Q9D287 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Bcas2Q9D287 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Bcas2Q9D287 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Bcas2Q9D287 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.02■□□□□ -0
Bcas2Q9D287 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Bcas2Q9D287 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Bcas2Q9D287 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Bcas2Q9D287 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Bcas2Q9D287 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Bcas2Q9D287 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.02■□□□□ -0
Bcas2Q9D287 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Bcas2Q9D287 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.02■□□□□ -0
Bcas2Q9D287 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.02■□□□□ -0
Bcas2Q9D287 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Bcas2Q9D287 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Bcas2Q9D287 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.02■□□□□ -0
Bcas2Q9D287 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Bcas2Q9D287 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Bcas2Q9D287 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Bcas2Q9D287 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Bcas2Q9D287 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Bcas2Q9D287 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Bcas2Q9D287 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Bcas2Q9D287 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Bcas2Q9D287 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Bcas2Q9D287 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Bcas2Q9D287 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Bcas2Q9D287 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Bcas2Q9D287 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Bcas2Q9D287 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Bcas2Q9D287 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Bcas2Q9D287 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Bcas2Q9D287 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Bcas2Q9D287 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.01□□□□□ -0.01
Bcas2Q9D287 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Bcas2Q9D287 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Bcas2Q9D287 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Bcas2Q9D287 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Bcas2Q9D287 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Bcas2Q9D287 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Bcas2Q9D287 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.01□□□□□ -0.01
Bcas2Q9D287 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Bcas2Q9D287 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.01□□□□□ -0.01
Bcas2Q9D287 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Bcas2Q9D287 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC15.01□□□□□ -0.01
Bcas2Q9D287 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.01□□□□□ -0.01
Bcas2Q9D287 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Bcas2Q9D287 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Bcas2Q9D287 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Bcas2Q9D287 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Bcas2Q9D287 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Bcas2Q9D287 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Bcas2Q9D287 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Bcas2Q9D287 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Bcas2Q9D287 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Bcas2Q9D287 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.01□□□□□ -0.01
Bcas2Q9D287 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Bcas2Q9D287 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15□□□□□ -0.01
Bcas2Q9D287 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Bcas2Q9D287 Gm5357-201ENSMUST00000212720 1924 ntBASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms