Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lysmd1Q9D0E3 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Lysmd1Q9D0E3 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Lysmd1Q9D0E3 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.44■□□□□ 0.22
Lysmd1Q9D0E3 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lysmd1Q9D0E3 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lysmd1Q9D0E3 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Lysmd1Q9D0E3 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lysmd1Q9D0E3 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Lysmd1Q9D0E3 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Lysmd1Q9D0E3 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lysmd1Q9D0E3 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lysmd1Q9D0E3 Gm14723-201ENSMUST00000118686 215 ntBASIC16.43■□□□□ 0.22
Lysmd1Q9D0E3 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC16.43■□□□□ 0.22
Lysmd1Q9D0E3 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lysmd1Q9D0E3 Gm8318-201ENSMUST00000182954 872 ntBASIC16.43■□□□□ 0.22
Lysmd1Q9D0E3 Gm27731-201ENSMUST00000185192 107 ntBASIC16.43■□□□□ 0.22
Lysmd1Q9D0E3 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Lysmd1Q9D0E3 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Lysmd1Q9D0E3 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Lysmd1Q9D0E3 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lysmd1Q9D0E3 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lysmd1Q9D0E3 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lysmd1Q9D0E3 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lysmd1Q9D0E3 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lysmd1Q9D0E3 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC16.43■□□□□ 0.22
Lysmd1Q9D0E3 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lysmd1Q9D0E3 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lysmd1Q9D0E3 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lysmd1Q9D0E3 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Lysmd1Q9D0E3 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Lysmd1Q9D0E3 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lysmd1Q9D0E3 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lysmd1Q9D0E3 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lysmd1Q9D0E3 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lysmd1Q9D0E3 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC16.42■□□□□ 0.22
Lysmd1Q9D0E3 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Lysmd1Q9D0E3 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
Lysmd1Q9D0E3 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC16.42■□□□□ 0.22
Lysmd1Q9D0E3 Gm6244-201ENSMUST00000178732 841 ntBASIC16.42■□□□□ 0.22
Lysmd1Q9D0E3 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC16.42■□□□□ 0.22
Lysmd1Q9D0E3 Gm7067-201ENSMUST00000207698 1249 ntBASIC16.42■□□□□ 0.22
Lysmd1Q9D0E3 AC165157.4-201ENSMUST00000220587 139 ntBASIC16.42■□□□□ 0.22
Lysmd1Q9D0E3 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lysmd1Q9D0E3 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lysmd1Q9D0E3 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.42■□□□□ 0.22
Lysmd1Q9D0E3 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lysmd1Q9D0E3 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Lysmd1Q9D0E3 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lysmd1Q9D0E3 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Lysmd1Q9D0E3 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Lysmd1Q9D0E3 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.41■□□□□ 0.22
Lysmd1Q9D0E3 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lysmd1Q9D0E3 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lysmd1Q9D0E3 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lysmd1Q9D0E3 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lysmd1Q9D0E3 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lysmd1Q9D0E3 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Lysmd1Q9D0E3 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC16.41■□□□□ 0.22
Lysmd1Q9D0E3 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lysmd1Q9D0E3 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC16.41■□□□□ 0.22
Lysmd1Q9D0E3 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Lysmd1Q9D0E3 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Lysmd1Q9D0E3 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lysmd1Q9D0E3 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC16.41■□□□□ 0.22
Lysmd1Q9D0E3 Klk2-ps-201ENSMUST00000205342 571 ntBASIC16.41■□□□□ 0.22
Lysmd1Q9D0E3 Gm18934-201ENSMUST00000216671 1044 ntBASIC16.41■□□□□ 0.22
Lysmd1Q9D0E3 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC16.41■□□□□ 0.22
Lysmd1Q9D0E3 AC155252.1-201ENSMUST00000226462 1208 ntBASIC16.41■□□□□ 0.22
Lysmd1Q9D0E3 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lysmd1Q9D0E3 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Lysmd1Q9D0E3 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lysmd1Q9D0E3 Gm24526-201ENSMUST00000082921 158 ntBASIC16.41■□□□□ 0.22
Lysmd1Q9D0E3 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lysmd1Q9D0E3 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lysmd1Q9D0E3 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Lysmd1Q9D0E3 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Lysmd1Q9D0E3 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Lysmd1Q9D0E3 AC164565.1-201ENSMUST00000217520 1484 ntBASIC16.41■□□□□ 0.22
Lysmd1Q9D0E3 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lysmd1Q9D0E3 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lysmd1Q9D0E3 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lysmd1Q9D0E3 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lysmd1Q9D0E3 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lysmd1Q9D0E3 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Lysmd1Q9D0E3 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Lysmd1Q9D0E3 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lysmd1Q9D0E3 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lysmd1Q9D0E3 Gm13233-201ENSMUST00000118760 1443 ntBASIC16.4■□□□□ 0.22
Lysmd1Q9D0E3 Gm13244-201ENSMUST00000118855 1446 ntBASIC16.4■□□□□ 0.22
Lysmd1Q9D0E3 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC16.4■□□□□ 0.22
Lysmd1Q9D0E3 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
Lysmd1Q9D0E3 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC16.4■□□□□ 0.22
Lysmd1Q9D0E3 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC16.4■□□□□ 0.22
Lysmd1Q9D0E3 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Lysmd1Q9D0E3 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Lysmd1Q9D0E3 Gm17794-201ENSMUST00000220252 955 ntBASIC16.4■□□□□ 0.22
Lysmd1Q9D0E3 AC132317.1-201ENSMUST00000227227 962 ntBASIC16.4■□□□□ 0.22
Lysmd1Q9D0E3 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lysmd1Q9D0E3 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms