Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC14.35□□□□□ -0.11
Trim13Q9CYB0 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC14.35□□□□□ -0.11
Trim13Q9CYB0 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim13Q9CYB0 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC14.35□□□□□ -0.11
Trim13Q9CYB0 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim13Q9CYB0 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim13Q9CYB0 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim13Q9CYB0 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.35□□□□□ -0.11
Trim13Q9CYB0 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim13Q9CYB0 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trim13Q9CYB0 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Trim13Q9CYB0 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim13Q9CYB0 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.35□□□□□ -0.11
Trim13Q9CYB0 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim13Q9CYB0 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim13Q9CYB0 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim13Q9CYB0 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim13Q9CYB0 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Trim13Q9CYB0 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim13Q9CYB0 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim13Q9CYB0 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim13Q9CYB0 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim13Q9CYB0 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim13Q9CYB0 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim13Q9CYB0 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim13Q9CYB0 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim13Q9CYB0 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim13Q9CYB0 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim13Q9CYB0 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim13Q9CYB0 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trim13Q9CYB0 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim13Q9CYB0 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim13Q9CYB0 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trim13Q9CYB0 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.34□□□□□ -0.11
Trim13Q9CYB0 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim13Q9CYB0 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim13Q9CYB0 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.34□□□□□ -0.11
Trim13Q9CYB0 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim13Q9CYB0 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim13Q9CYB0 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Trim13Q9CYB0 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trim13Q9CYB0 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim13Q9CYB0 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim13Q9CYB0 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim13Q9CYB0 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim13Q9CYB0 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim13Q9CYB0 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim13Q9CYB0 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Trim13Q9CYB0 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim13Q9CYB0 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.33□□□□□ -0.11
Trim13Q9CYB0 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim13Q9CYB0 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Trim13Q9CYB0 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trim13Q9CYB0 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim13Q9CYB0 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim13Q9CYB0 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.33□□□□□ -0.12
Trim13Q9CYB0 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.33□□□□□ -0.12
Trim13Q9CYB0 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim13Q9CYB0 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.33□□□□□ -0.12
Trim13Q9CYB0 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.33□□□□□ -0.12
Trim13Q9CYB0 Gm26039-201ENSMUST00000158152 144 ntBASIC14.33□□□□□ -0.12
Trim13Q9CYB0 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim13Q9CYB0 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.33□□□□□ -0.12
Trim13Q9CYB0 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim13Q9CYB0 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Trim13Q9CYB0 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim13Q9CYB0 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim13Q9CYB0 Gm20472-201ENSMUST00000174403 1240 ntBASIC14.33□□□□□ -0.12
Trim13Q9CYB0 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim13Q9CYB0 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.33□□□□□ -0.12
Trim13Q9CYB0 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim13Q9CYB0 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim13Q9CYB0 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim13Q9CYB0 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim13Q9CYB0 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim13Q9CYB0 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim13Q9CYB0 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim13Q9CYB0 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim13Q9CYB0 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim13Q9CYB0 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trim13Q9CYB0 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.33□□□□□ -0.12
Trim13Q9CYB0 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim13Q9CYB0 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim13Q9CYB0 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim13Q9CYB0 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim13Q9CYB0 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim13Q9CYB0 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim13Q9CYB0 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim13Q9CYB0 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim13Q9CYB0 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim13Q9CYB0 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim13Q9CYB0 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim13Q9CYB0 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim13Q9CYB0 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Trim13Q9CYB0 Mir1668-201ENSMUST00000184114 107 ntBASIC14.32□□□□□ -0.12
Trim13Q9CYB0 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC14.32□□□□□ -0.12
Trim13Q9CYB0 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.32□□□□□ -0.12
Trim13Q9CYB0 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC14.32□□□□□ -0.12
Trim13Q9CYB0 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim13Q9CYB0 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms