Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smc3Q9CW03 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
Smc3Q9CW03 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smc3Q9CW03 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
Smc3Q9CW03 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Smc3Q9CW03 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smc3Q9CW03 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC18.24■□□□□ 0.51
Smc3Q9CW03 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smc3Q9CW03 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC18.24■□□□□ 0.51
Smc3Q9CW03 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smc3Q9CW03 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smc3Q9CW03 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Smc3Q9CW03 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc3Q9CW03 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Smc3Q9CW03 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Smc3Q9CW03 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc3Q9CW03 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc3Q9CW03 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC18.23■□□□□ 0.51
Smc3Q9CW03 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc3Q9CW03 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.23■□□□□ 0.51
Smc3Q9CW03 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC18.23■□□□□ 0.51
Smc3Q9CW03 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Smc3Q9CW03 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc3Q9CW03 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc3Q9CW03 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc3Q9CW03 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
Smc3Q9CW03 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc3Q9CW03 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC18.23■□□□□ 0.51
Smc3Q9CW03 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc3Q9CW03 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc3Q9CW03 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc3Q9CW03 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc3Q9CW03 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc3Q9CW03 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc3Q9CW03 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Smc3Q9CW03 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc3Q9CW03 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc3Q9CW03 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc3Q9CW03 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Smc3Q9CW03 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc3Q9CW03 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Smc3Q9CW03 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC18.22■□□□□ 0.51
Smc3Q9CW03 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC18.22■□□□□ 0.51
Smc3Q9CW03 AA414768-201ENSMUST00000121924 1257 ntBASIC18.22■□□□□ 0.51
Smc3Q9CW03 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC18.22■□□□□ 0.51
Smc3Q9CW03 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC18.22■□□□□ 0.51
Smc3Q9CW03 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Smc3Q9CW03 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Smc3Q9CW03 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc3Q9CW03 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc3Q9CW03 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc3Q9CW03 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc3Q9CW03 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
Smc3Q9CW03 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc3Q9CW03 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc3Q9CW03 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Smc3Q9CW03 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc3Q9CW03 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc3Q9CW03 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc3Q9CW03 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc3Q9CW03 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc3Q9CW03 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc3Q9CW03 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Smc3Q9CW03 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Smc3Q9CW03 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
Smc3Q9CW03 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC18.21■□□□□ 0.51
Smc3Q9CW03 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Smc3Q9CW03 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc3Q9CW03 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.21■□□□□ 0.51
Smc3Q9CW03 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Smc3Q9CW03 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc3Q9CW03 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Smc3Q9CW03 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc3Q9CW03 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc3Q9CW03 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc3Q9CW03 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc3Q9CW03 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Smc3Q9CW03 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc3Q9CW03 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Smc3Q9CW03 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Smc3Q9CW03 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Smc3Q9CW03 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc3Q9CW03 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc3Q9CW03 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc3Q9CW03 Gm11839-201ENSMUST00000120647 1953 ntBASIC18.21■□□□□ 0.5
Smc3Q9CW03 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC18.2■□□□□ 0.5
Smc3Q9CW03 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Smc3Q9CW03 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
Smc3Q9CW03 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Smc3Q9CW03 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Smc3Q9CW03 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc3Q9CW03 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc3Q9CW03 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Smc3Q9CW03 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc3Q9CW03 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc3Q9CW03 Gm4609-201ENSMUST00000106443 1002 ntBASIC18.2■□□□□ 0.5
Smc3Q9CW03 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Smc3Q9CW03 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Smc3Q9CW03 Gm5138-201ENSMUST00000113842 1002 ntBASIC18.2■□□□□ 0.5
Smc3Q9CW03 Gm15191-201ENSMUST00000117933 1000 ntBASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms