Protein–RNA interactions for Protein: Q9CR55

UPF0547 protein C16orf87 homolog, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CR55 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Q9CR55 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Q9CR55 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Q9CR55 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Q9CR55 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Q9CR55 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Q9CR55 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Q9CR55 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Q9CR55 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC14.43□□□□□ -0.1
Q9CR55 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Q9CR55 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Q9CR55 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Q9CR55 AC140264.2-202ENSMUST00000218746 817 ntBASIC14.43□□□□□ -0.1
Q9CR55 AC158538.1-201ENSMUST00000225870 294 ntBASIC14.43□□□□□ -0.1
Q9CR55 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Q9CR55 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Q9CR55 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Q9CR55 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Q9CR55 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Q9CR55 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Q9CR55 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC14.43□□□□□ -0.1
Q9CR55 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Q9CR55 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Q9CR55 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.43□□□□□ -0.1
Q9CR55 Flg-201ENSMUST00000050758 1488 ntBASIC14.43□□□□□ -0.1
Q9CR55 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Q9CR55 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Q9CR55 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Q9CR55 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.43□□□□□ -0.1
Q9CR55 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Q9CR55 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.42□□□□□ -0.1
Q9CR55 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Q9CR55 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Q9CR55 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Q9CR55 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Q9CR55 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Q9CR55 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Q9CR55 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Q9CR55 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Q9CR55 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Q9CR55 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Q9CR55 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.42□□□□□ -0.1
Q9CR55 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Q9CR55 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Q9CR55 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Q9CR55 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Q9CR55 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Q9CR55 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.42□□□□□ -0.1
Q9CR55 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Q9CR55 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Q9CR55 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Q9CR55 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Q9CR55 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Q9CR55 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Q9CR55 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Q9CR55 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Q9CR55 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Q9CR55 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Q9CR55 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.41□□□□□ -0.1
Q9CR55 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Q9CR55 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Q9CR55 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Q9CR55 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Q9CR55 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Q9CR55 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Q9CR55 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Q9CR55 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC14.41□□□□□ -0.1
Q9CR55 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Q9CR55 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Q9CR55 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Q9CR55 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Q9CR55 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Q9CR55 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Q9CR55 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.41□□□□□ -0.1
Q9CR55 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Q9CR55 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.41□□□□□ -0.1
Q9CR55 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Q9CR55 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Q9CR55 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Q9CR55 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Q9CR55 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Q9CR55 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Q9CR55 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Q9CR55 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.4□□□□□ -0.1
Q9CR55 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.4□□□□□ -0.1
Q9CR55 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Q9CR55 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Q9CR55 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Q9CR55 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Q9CR55 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Q9CR55 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Q9CR55 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Q9CR55 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Q9CR55 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Q9CR55 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Q9CR55 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC14.4□□□□□ -0.1
Q9CR55 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC14.4□□□□□ -0.1
Q9CR55 Gm10698-201ENSMUST00000182663 604 ntBASIC14.4□□□□□ -0.1
Q9CR55 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC14.4□□□□□ -0.1
Q9CR55 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms