Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RTRAFQ9CQE8 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
RTRAFQ9CQE8 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RTRAFQ9CQE8 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RTRAFQ9CQE8 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RTRAFQ9CQE8 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RTRAFQ9CQE8 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RTRAFQ9CQE8 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RTRAFQ9CQE8 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
RTRAFQ9CQE8 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
RTRAFQ9CQE8 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RTRAFQ9CQE8 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RTRAFQ9CQE8 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
RTRAFQ9CQE8 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
RTRAFQ9CQE8 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
RTRAFQ9CQE8 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
RTRAFQ9CQE8 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RTRAFQ9CQE8 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RTRAFQ9CQE8 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RTRAFQ9CQE8 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RTRAFQ9CQE8 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.64□□□□□ -0.39
RTRAFQ9CQE8 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RTRAFQ9CQE8 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RTRAFQ9CQE8 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
RTRAFQ9CQE8 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RTRAFQ9CQE8 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RTRAFQ9CQE8 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.64□□□□□ -0.39
RTRAFQ9CQE8 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RTRAFQ9CQE8 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RTRAFQ9CQE8 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
RTRAFQ9CQE8 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
RTRAFQ9CQE8 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RTRAFQ9CQE8 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RTRAFQ9CQE8 Gm7638-201ENSMUST00000121348 967 ntBASIC12.64□□□□□ -0.39
RTRAFQ9CQE8 Gm18284-201ENSMUST00000172604 624 ntBASIC12.64□□□□□ -0.39
RTRAFQ9CQE8 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC12.64□□□□□ -0.39
RTRAFQ9CQE8 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC12.64□□□□□ -0.39
RTRAFQ9CQE8 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RTRAFQ9CQE8 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RTRAFQ9CQE8 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RTRAFQ9CQE8 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RTRAFQ9CQE8 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
RTRAFQ9CQE8 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
RTRAFQ9CQE8 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RTRAFQ9CQE8 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RTRAFQ9CQE8 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RTRAFQ9CQE8 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RTRAFQ9CQE8 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
RTRAFQ9CQE8 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RTRAFQ9CQE8 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC12.64□□□□□ -0.39
RTRAFQ9CQE8 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RTRAFQ9CQE8 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RTRAFQ9CQE8 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
RTRAFQ9CQE8 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RTRAFQ9CQE8 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RTRAFQ9CQE8 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RTRAFQ9CQE8 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
RTRAFQ9CQE8 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RTRAFQ9CQE8 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RTRAFQ9CQE8 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RTRAFQ9CQE8 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RTRAFQ9CQE8 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RTRAFQ9CQE8 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RTRAFQ9CQE8 H2-K2-201ENSMUST00000174250 1049 ntBASIC12.63□□□□□ -0.39
RTRAFQ9CQE8 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
RTRAFQ9CQE8 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RTRAFQ9CQE8 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC12.63□□□□□ -0.39
RTRAFQ9CQE8 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.63□□□□□ -0.39
RTRAFQ9CQE8 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RTRAFQ9CQE8 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
RTRAFQ9CQE8 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
RTRAFQ9CQE8 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RTRAFQ9CQE8 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC12.62□□□□□ -0.39
RTRAFQ9CQE8 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RTRAFQ9CQE8 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RTRAFQ9CQE8 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
RTRAFQ9CQE8 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RTRAFQ9CQE8 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
RTRAFQ9CQE8 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RTRAFQ9CQE8 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RTRAFQ9CQE8 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC12.62□□□□□ -0.39
RTRAFQ9CQE8 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RTRAFQ9CQE8 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC12.62□□□□□ -0.39
RTRAFQ9CQE8 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
RTRAFQ9CQE8 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC12.62□□□□□ -0.39
RTRAFQ9CQE8 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RTRAFQ9CQE8 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RTRAFQ9CQE8 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RTRAFQ9CQE8 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RTRAFQ9CQE8 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RTRAFQ9CQE8 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RTRAFQ9CQE8 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RTRAFQ9CQE8 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RTRAFQ9CQE8 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.62□□□□□ -0.39
RTRAFQ9CQE8 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
RTRAFQ9CQE8 Gm32996-201ENSMUST00000199828 1447 ntBASIC12.62□□□□□ -0.39
RTRAFQ9CQE8 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RTRAFQ9CQE8 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RTRAFQ9CQE8 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RTRAFQ9CQE8 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms