Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim16Q99PP9 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Trim16Q99PP9 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim16Q99PP9 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim16Q99PP9 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim16Q99PP9 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim16Q99PP9 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC15.17■□□□□ 0.02
Trim16Q99PP9 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Trim16Q99PP9 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim16Q99PP9 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim16Q99PP9 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Trim16Q99PP9 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.17■□□□□ 0.02
Trim16Q99PP9 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim16Q99PP9 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim16Q99PP9 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim16Q99PP9 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim16Q99PP9 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim16Q99PP9 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim16Q99PP9 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trim16Q99PP9 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim16Q99PP9 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trim16Q99PP9 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
Trim16Q99PP9 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
Trim16Q99PP9 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim16Q99PP9 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim16Q99PP9 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim16Q99PP9 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.16■□□□□ 0.02
Trim16Q99PP9 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trim16Q99PP9 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trim16Q99PP9 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.16■□□□□ 0.02
Trim16Q99PP9 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim16Q99PP9 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim16Q99PP9 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trim16Q99PP9 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.16■□□□□ 0.02
Trim16Q99PP9 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Trim16Q99PP9 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.16■□□□□ 0.02
Trim16Q99PP9 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.16■□□□□ 0.02
Trim16Q99PP9 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.16■□□□□ 0.02
Trim16Q99PP9 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim16Q99PP9 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.16■□□□□ 0.02
Trim16Q99PP9 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim16Q99PP9 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim16Q99PP9 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim16Q99PP9 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim16Q99PP9 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim16Q99PP9 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim16Q99PP9 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim16Q99PP9 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim16Q99PP9 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim16Q99PP9 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim16Q99PP9 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trim16Q99PP9 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim16Q99PP9 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim16Q99PP9 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Trim16Q99PP9 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim16Q99PP9 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim16Q99PP9 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim16Q99PP9 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Trim16Q99PP9 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim16Q99PP9 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim16Q99PP9 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim16Q99PP9 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim16Q99PP9 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim16Q99PP9 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim16Q99PP9 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim16Q99PP9 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.15■□□□□ 0.02
Trim16Q99PP9 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim16Q99PP9 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim16Q99PP9 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.15■□□□□ 0.02
Trim16Q99PP9 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC15.15■□□□□ 0.02
Trim16Q99PP9 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.15■□□□□ 0.02
Trim16Q99PP9 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.15■□□□□ 0.02
Trim16Q99PP9 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim16Q99PP9 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim16Q99PP9 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim16Q99PP9 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Trim16Q99PP9 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim16Q99PP9 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim16Q99PP9 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim16Q99PP9 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim16Q99PP9 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim16Q99PP9 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim16Q99PP9 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim16Q99PP9 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Trim16Q99PP9 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim16Q99PP9 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim16Q99PP9 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim16Q99PP9 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim16Q99PP9 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim16Q99PP9 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim16Q99PP9 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim16Q99PP9 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim16Q99PP9 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim16Q99PP9 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim16Q99PP9 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trim16Q99PP9 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim16Q99PP9 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim16Q99PP9 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Trim16Q99PP9 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.14■□□□□ 0.01
Trim16Q99PP9 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms