Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Gm13829-201ENSMUST00000119600 138 ntBASIC17.33■□□□□ 0.36
Pcdh15Q99PJ1 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC17.33■□□□□ 0.36
Pcdh15Q99PJ1 Gm37748-201ENSMUST00000194379 1140 ntBASIC17.33■□□□□ 0.36
Pcdh15Q99PJ1 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdh15Q99PJ1 Gm20445-201ENSMUST00000061905 565 ntBASIC17.33■□□□□ 0.36
Pcdh15Q99PJ1 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC17.33■□□□□ 0.36
Pcdh15Q99PJ1 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Pcdh15Q99PJ1 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
Pcdh15Q99PJ1 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdh15Q99PJ1 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdh15Q99PJ1 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdh15Q99PJ1 Rarb-207ENSMUST00000225921 2756 ntBASIC17.32■□□□□ 0.36
Pcdh15Q99PJ1 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh15Q99PJ1 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh15Q99PJ1 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh15Q99PJ1 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh15Q99PJ1 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Pcdh15Q99PJ1 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh15Q99PJ1 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh15Q99PJ1 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh15Q99PJ1 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh15Q99PJ1 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Pcdh15Q99PJ1 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh15Q99PJ1 Mir1897-201ENSMUST00000122581 272 ntBASIC17.32■□□□□ 0.36
Pcdh15Q99PJ1 Mir1938-201ENSMUST00000158746 100 ntBASIC17.32■□□□□ 0.36
Pcdh15Q99PJ1 Ighv5-13-201ENSMUST00000193550 290 ntBASIC17.32■□□□□ 0.36
Pcdh15Q99PJ1 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh15Q99PJ1 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh15Q99PJ1 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh15Q99PJ1 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh15Q99PJ1 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh15Q99PJ1 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh15Q99PJ1 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh15Q99PJ1 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Pcdh15Q99PJ1 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC17.31■□□□□ 0.36
Pcdh15Q99PJ1 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh15Q99PJ1 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh15Q99PJ1 AC149294.4-201ENSMUST00000227870 882 ntBASIC17.31■□□□□ 0.36
Pcdh15Q99PJ1 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh15Q99PJ1 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh15Q99PJ1 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh15Q99PJ1 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh15Q99PJ1 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Pcdh15Q99PJ1 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh15Q99PJ1 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh15Q99PJ1 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh15Q99PJ1 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Pcdh15Q99PJ1 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh15Q99PJ1 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC17.31■□□□□ 0.36
Pcdh15Q99PJ1 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC17.31■□□□□ 0.36
Pcdh15Q99PJ1 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh15Q99PJ1 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh15Q99PJ1 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Pcdh15Q99PJ1 Gm8131-201ENSMUST00000213783 1570 ntBASIC17.3■□□□□ 0.36
Pcdh15Q99PJ1 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC17.3■□□□□ 0.36
Pcdh15Q99PJ1 Gm16476-201ENSMUST00000221544 139 ntBASIC17.3■□□□□ 0.36
Pcdh15Q99PJ1 Rassf8-202ENSMUST00000058538 1131 ntBASIC17.3■□□□□ 0.36
Pcdh15Q99PJ1 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Pcdh15Q99PJ1 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh15Q99PJ1 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC17.3■□□□□ 0.36
Pcdh15Q99PJ1 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh15Q99PJ1 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh15Q99PJ1 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC17.3■□□□□ 0.36
Pcdh15Q99PJ1 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh15Q99PJ1 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh15Q99PJ1 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh15Q99PJ1 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh15Q99PJ1 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh15Q99PJ1 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh15Q99PJ1 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh15Q99PJ1 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Pcdh15Q99PJ1 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh15Q99PJ1 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh15Q99PJ1 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC17.29■□□□□ 0.36
Pcdh15Q99PJ1 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh15Q99PJ1 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC17.29■□□□□ 0.36
Pcdh15Q99PJ1 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh15Q99PJ1 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh15Q99PJ1 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh15Q99PJ1 Gm17150-201ENSMUST00000165577 381 ntBASIC17.29■□□□□ 0.36
Pcdh15Q99PJ1 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh15Q99PJ1 Gm7390-201ENSMUST00000212452 1216 ntBASIC17.29■□□□□ 0.36
Pcdh15Q99PJ1 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh15Q99PJ1 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh15Q99PJ1 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh15Q99PJ1 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh15Q99PJ1 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.29■□□□□ 0.36
Pcdh15Q99PJ1 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh15Q99PJ1 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh15Q99PJ1 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh15Q99PJ1 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh15Q99PJ1 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh15Q99PJ1 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC17.28■□□□□ 0.36
Pcdh15Q99PJ1 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh15Q99PJ1 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.28■□□□□ 0.36
Pcdh15Q99PJ1 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh15Q99PJ1 Gm11918-201ENSMUST00000121660 179 ntBASIC17.28■□□□□ 0.36
Pcdh15Q99PJ1 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Pcdh15Q99PJ1 Gm7556-201ENSMUST00000201178 1084 ntBASIC17.28■□□□□ 0.36
Pcdh15Q99PJ1 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms