Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC19.82■□□□□ 0.76
Rtn4Q99P72 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rtn4Q99P72 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rtn4Q99P72 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
Rtn4Q99P72 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rtn4Q99P72 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rtn4Q99P72 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Rtn4Q99P72 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Rtn4Q99P72 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rtn4Q99P72 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rtn4Q99P72 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rtn4Q99P72 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
Rtn4Q99P72 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rtn4Q99P72 Gm11594-201ENSMUST00000122313 162 ntBASIC19.81■□□□□ 0.76
Rtn4Q99P72 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC19.81■□□□□ 0.76
Rtn4Q99P72 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
Rtn4Q99P72 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC19.81■□□□□ 0.76
Rtn4Q99P72 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rtn4Q99P72 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC19.81■□□□□ 0.76
Rtn4Q99P72 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rtn4Q99P72 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rtn4Q99P72 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rtn4Q99P72 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rtn4Q99P72 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rtn4Q99P72 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rtn4Q99P72 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rtn4Q99P72 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rtn4Q99P72 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rtn4Q99P72 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC19.8■□□□□ 0.76
Rtn4Q99P72 Letm2-206ENSMUST00000210234 837 ntTSL 5 BASIC19.8■□□□□ 0.76
Rtn4Q99P72 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC19.8■□□□□ 0.76
Rtn4Q99P72 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC19.8■□□□□ 0.76
Rtn4Q99P72 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rtn4Q99P72 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Rtn4Q99P72 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rtn4Q99P72 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Rtn4Q99P72 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rtn4Q99P72 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rtn4Q99P72 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Rtn4Q99P72 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rtn4Q99P72 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rtn4Q99P72 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rtn4Q99P72 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rtn4Q99P72 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rtn4Q99P72 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rtn4Q99P72 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rtn4Q99P72 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rtn4Q99P72 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rtn4Q99P72 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rtn4Q99P72 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rtn4Q99P72 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rtn4Q99P72 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
Rtn4Q99P72 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rtn4Q99P72 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rtn4Q99P72 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rtn4Q99P72 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rtn4Q99P72 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC19.79■□□□□ 0.76
Rtn4Q99P72 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC19.79■□□□□ 0.76
Rtn4Q99P72 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rtn4Q99P72 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rtn4Q99P72 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rtn4Q99P72 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rtn4Q99P72 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rtn4Q99P72 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC19.79■□□□□ 0.76
Rtn4Q99P72 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rtn4Q99P72 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rtn4Q99P72 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rtn4Q99P72 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rtn4Q99P72 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rtn4Q99P72 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rtn4Q99P72 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC19.78■□□□□ 0.76
Rtn4Q99P72 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Rtn4Q99P72 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rtn4Q99P72 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rtn4Q99P72 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rtn4Q99P72 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rtn4Q99P72 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rtn4Q99P72 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rtn4Q99P72 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC19.78■□□□□ 0.76
Rtn4Q99P72 Gm8349-201ENSMUST00000182720 1003 ntBASIC19.78■□□□□ 0.76
Rtn4Q99P72 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC19.78■□□□□ 0.76
Rtn4Q99P72 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC19.78■□□□□ 0.76
Rtn4Q99P72 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Rtn4Q99P72 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rtn4Q99P72 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC19.78■□□□□ 0.76
Rtn4Q99P72 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rtn4Q99P72 Gm6858-201ENSMUST00000208582 1468 ntBASIC19.78■□□□□ 0.76
Rtn4Q99P72 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rtn4Q99P72 AC132265.1-201ENSMUST00000219233 1665 ntBASIC19.78■□□□□ 0.76
Rtn4Q99P72 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rtn4Q99P72 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rtn4Q99P72 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rtn4Q99P72 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rtn4Q99P72 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rtn4Q99P72 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Rtn4Q99P72 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rtn4Q99P72 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC19.77■□□□□ 0.76
Rtn4Q99P72 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rtn4Q99P72 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rtn4Q99P72 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms