Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Col25a1Q99MQ5 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col25a1Q99MQ5 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col25a1Q99MQ5 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col25a1Q99MQ5 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col25a1Q99MQ5 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
Col25a1Q99MQ5 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Col25a1Q99MQ5 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col25a1Q99MQ5 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col25a1Q99MQ5 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col25a1Q99MQ5 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col25a1Q99MQ5 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col25a1Q99MQ5 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col25a1Q99MQ5 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Col25a1Q99MQ5 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16■□□□□ 0.15
Col25a1Q99MQ5 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16■□□□□ 0.15
Col25a1Q99MQ5 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
Col25a1Q99MQ5 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Col25a1Q99MQ5 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col25a1Q99MQ5 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Col25a1Q99MQ5 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC16■□□□□ 0.15
Col25a1Q99MQ5 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC16■□□□□ 0.15
Col25a1Q99MQ5 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Col25a1Q99MQ5 Gm6888-201ENSMUST00000221983 706 ntBASIC16■□□□□ 0.15
Col25a1Q99MQ5 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col25a1Q99MQ5 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col25a1Q99MQ5 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col25a1Q99MQ5 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col25a1Q99MQ5 Gm7901-201ENSMUST00000120430 1597 ntBASIC16■□□□□ 0.15
Col25a1Q99MQ5 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col25a1Q99MQ5 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Col25a1Q99MQ5 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.99■□□□□ 0.15
Col25a1Q99MQ5 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col25a1Q99MQ5 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Col25a1Q99MQ5 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.99■□□□□ 0.15
Col25a1Q99MQ5 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Col25a1Q99MQ5 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col25a1Q99MQ5 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Col25a1Q99MQ5 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col25a1Q99MQ5 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col25a1Q99MQ5 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.99■□□□□ 0.15
Col25a1Q99MQ5 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.99■□□□□ 0.15
Col25a1Q99MQ5 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Col25a1Q99MQ5 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.99■□□□□ 0.15
Col25a1Q99MQ5 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC15.99■□□□□ 0.15
Col25a1Q99MQ5 Gm15487-201ENSMUST00000122373 465 ntBASIC15.99■□□□□ 0.15
Col25a1Q99MQ5 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.99■□□□□ 0.15
Col25a1Q99MQ5 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col25a1Q99MQ5 Rpph1-201ENSMUST00000175096 319 ntBASIC15.99■□□□□ 0.15
Col25a1Q99MQ5 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15.99■□□□□ 0.15
Col25a1Q99MQ5 Gm18057-201ENSMUST00000208220 503 ntBASIC15.99■□□□□ 0.15
Col25a1Q99MQ5 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col25a1Q99MQ5 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Col25a1Q99MQ5 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Col25a1Q99MQ5 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Col25a1Q99MQ5 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Col25a1Q99MQ5 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col25a1Q99MQ5 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col25a1Q99MQ5 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Col25a1Q99MQ5 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col25a1Q99MQ5 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col25a1Q99MQ5 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col25a1Q99MQ5 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col25a1Q99MQ5 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC15.98■□□□□ 0.15
Col25a1Q99MQ5 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col25a1Q99MQ5 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col25a1Q99MQ5 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col25a1Q99MQ5 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col25a1Q99MQ5 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col25a1Q99MQ5 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col25a1Q99MQ5 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Col25a1Q99MQ5 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Col25a1Q99MQ5 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Col25a1Q99MQ5 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Col25a1Q99MQ5 Gm6415-201ENSMUST00000118488 348 ntBASIC15.98■□□□□ 0.15
Col25a1Q99MQ5 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Col25a1Q99MQ5 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Col25a1Q99MQ5 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col25a1Q99MQ5 AC132863.2-201ENSMUST00000226643 799 ntBASIC15.98■□□□□ 0.15
Col25a1Q99MQ5 Rbfox2-208ENSMUST00000227930 1218 ntBASIC15.98■□□□□ 0.15
Col25a1Q99MQ5 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col25a1Q99MQ5 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col25a1Q99MQ5 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col25a1Q99MQ5 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Col25a1Q99MQ5 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Col25a1Q99MQ5 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col25a1Q99MQ5 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.98■□□□□ 0.15
Col25a1Q99MQ5 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col25a1Q99MQ5 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col25a1Q99MQ5 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col25a1Q99MQ5 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col25a1Q99MQ5 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col25a1Q99MQ5 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Col25a1Q99MQ5 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Col25a1Q99MQ5 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col25a1Q99MQ5 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.97■□□□□ 0.15
Col25a1Q99MQ5 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Col25a1Q99MQ5 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col25a1Q99MQ5 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col25a1Q99MQ5 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms