Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.67□□□□□ -0.06
Chmp1b1Q99LU0 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
Chmp1b1Q99LU0 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp1b1Q99LU0 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp1b1Q99LU0 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp1b1Q99LU0 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp1b1Q99LU0 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Chmp1b1Q99LU0 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp1b1Q99LU0 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Chmp1b1Q99LU0 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp1b1Q99LU0 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.66□□□□□ -0.06
Chmp1b1Q99LU0 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp1b1Q99LU0 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Chmp1b1Q99LU0 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Chmp1b1Q99LU0 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.66□□□□□ -0.06
Chmp1b1Q99LU0 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp1b1Q99LU0 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp1b1Q99LU0 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp1b1Q99LU0 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp1b1Q99LU0 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp1b1Q99LU0 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp1b1Q99LU0 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp1b1Q99LU0 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.66□□□□□ -0.06
Chmp1b1Q99LU0 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp1b1Q99LU0 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp1b1Q99LU0 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp1b1Q99LU0 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
Chmp1b1Q99LU0 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp1b1Q99LU0 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp1b1Q99LU0 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp1b1Q99LU0 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp1b1Q99LU0 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.65□□□□□ -0.06
Chmp1b1Q99LU0 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Chmp1b1Q99LU0 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp1b1Q99LU0 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.65□□□□□ -0.06
Chmp1b1Q99LU0 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.65□□□□□ -0.06
Chmp1b1Q99LU0 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Chmp1b1Q99LU0 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Chmp1b1Q99LU0 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Chmp1b1Q99LU0 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.65□□□□□ -0.06
Chmp1b1Q99LU0 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp1b1Q99LU0 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp1b1Q99LU0 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp1b1Q99LU0 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp1b1Q99LU0 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp1b1Q99LU0 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp1b1Q99LU0 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
Chmp1b1Q99LU0 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp1b1Q99LU0 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp1b1Q99LU0 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
Chmp1b1Q99LU0 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp1b1Q99LU0 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp1b1Q99LU0 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp1b1Q99LU0 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Chmp1b1Q99LU0 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp1b1Q99LU0 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.64□□□□□ -0.07
Chmp1b1Q99LU0 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Chmp1b1Q99LU0 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp1b1Q99LU0 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.64□□□□□ -0.07
Chmp1b1Q99LU0 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Chmp1b1Q99LU0 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.64□□□□□ -0.07
Chmp1b1Q99LU0 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp1b1Q99LU0 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.64□□□□□ -0.07
Chmp1b1Q99LU0 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.64□□□□□ -0.07
Chmp1b1Q99LU0 Gm44454-201ENSMUST00000198541 138 ntBASIC14.64□□□□□ -0.07
Chmp1b1Q99LU0 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp1b1Q99LU0 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp1b1Q99LU0 Prob1-201ENSMUST00000097619 3021 ntBASIC14.64□□□□□ -0.07
Chmp1b1Q99LU0 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Chmp1b1Q99LU0 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp1b1Q99LU0 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp1b1Q99LU0 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp1b1Q99LU0 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp1b1Q99LU0 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp1b1Q99LU0 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp1b1Q99LU0 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp1b1Q99LU0 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp1b1Q99LU0 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp1b1Q99LU0 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp1b1Q99LU0 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp1b1Q99LU0 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp1b1Q99LU0 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp1b1Q99LU0 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Chmp1b1Q99LU0 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp1b1Q99LU0 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp1b1Q99LU0 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp1b1Q99LU0 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp1b1Q99LU0 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp1b1Q99LU0 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp1b1Q99LU0 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp1b1Q99LU0 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp1b1Q99LU0 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp1b1Q99LU0 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp1b1Q99LU0 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.63□□□□□ -0.07
Chmp1b1Q99LU0 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.63□□□□□ -0.07
Chmp1b1Q99LU0 Mir6404-201ENSMUST00000183699 94 ntBASIC14.63□□□□□ -0.07
Chmp1b1Q99LU0 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.63□□□□□ -0.07
Chmp1b1Q99LU0 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp1b1Q99LU0 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp1b1Q99LU0 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms