Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC15.45■□□□□ 0.06
Cstf1Q99LC2 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC15.45■□□□□ 0.06
Cstf1Q99LC2 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cstf1Q99LC2 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.45■□□□□ 0.06
Cstf1Q99LC2 Gm19164-201ENSMUST00000210667 640 ntBASIC15.45■□□□□ 0.06
Cstf1Q99LC2 Thap2-203ENSMUST00000218989 527 ntBASIC15.45■□□□□ 0.06
Cstf1Q99LC2 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.45■□□□□ 0.06
Cstf1Q99LC2 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC15.45■□□□□ 0.06
Cstf1Q99LC2 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Cstf1Q99LC2 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
Cstf1Q99LC2 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cstf1Q99LC2 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cstf1Q99LC2 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cstf1Q99LC2 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cstf1Q99LC2 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cstf1Q99LC2 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cstf1Q99LC2 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cstf1Q99LC2 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Cstf1Q99LC2 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cstf1Q99LC2 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Cstf1Q99LC2 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cstf1Q99LC2 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cstf1Q99LC2 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cstf1Q99LC2 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cstf1Q99LC2 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cstf1Q99LC2 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cstf1Q99LC2 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cstf1Q99LC2 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cstf1Q99LC2 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cstf1Q99LC2 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Cstf1Q99LC2 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Cstf1Q99LC2 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC15.44■□□□□ 0.06
Cstf1Q99LC2 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Cstf1Q99LC2 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.44■□□□□ 0.06
Cstf1Q99LC2 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.44■□□□□ 0.06
Cstf1Q99LC2 Gm20553-201ENSMUST00000204205 844 ntBASIC15.44■□□□□ 0.06
Cstf1Q99LC2 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC15.44■□□□□ 0.06
Cstf1Q99LC2 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC15.44■□□□□ 0.06
Cstf1Q99LC2 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cstf1Q99LC2 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cstf1Q99LC2 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Cstf1Q99LC2 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cstf1Q99LC2 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Cstf1Q99LC2 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cstf1Q99LC2 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cstf1Q99LC2 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Cstf1Q99LC2 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cstf1Q99LC2 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Cstf1Q99LC2 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cstf1Q99LC2 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cstf1Q99LC2 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cstf1Q99LC2 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.44■□□□□ 0.06
Cstf1Q99LC2 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cstf1Q99LC2 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cstf1Q99LC2 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Cstf1Q99LC2 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cstf1Q99LC2 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cstf1Q99LC2 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cstf1Q99LC2 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cstf1Q99LC2 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cstf1Q99LC2 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cstf1Q99LC2 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Cstf1Q99LC2 Dancr-204ENSMUST00000132389 2347 ntBASIC15.43■□□□□ 0.06
Cstf1Q99LC2 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cstf1Q99LC2 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Cstf1Q99LC2 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Cstf1Q99LC2 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.43■□□□□ 0.06
Cstf1Q99LC2 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cstf1Q99LC2 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Cstf1Q99LC2 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cstf1Q99LC2 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cstf1Q99LC2 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cstf1Q99LC2 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cstf1Q99LC2 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.43■□□□□ 0.06
Cstf1Q99LC2 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cstf1Q99LC2 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cstf1Q99LC2 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Cstf1Q99LC2 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cstf1Q99LC2 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cstf1Q99LC2 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Cstf1Q99LC2 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Cstf1Q99LC2 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cstf1Q99LC2 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cstf1Q99LC2 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cstf1Q99LC2 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cstf1Q99LC2 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC15.42■□□□□ 0.06
Cstf1Q99LC2 AC126408.1-201ENSMUST00000225184 523 ntBASIC15.42■□□□□ 0.06
Cstf1Q99LC2 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.42■□□□□ 0.06
Cstf1Q99LC2 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Cstf1Q99LC2 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Cstf1Q99LC2 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cstf1Q99LC2 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cstf1Q99LC2 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Cstf1Q99LC2 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cstf1Q99LC2 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cstf1Q99LC2 AC159621.2-201ENSMUST00000223519 1326 ntBASIC15.42■□□□□ 0.06
Cstf1Q99LC2 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.42■□□□□ 0.06
Cstf1Q99LC2 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cstf1Q99LC2 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cstf1Q99LC2 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms