Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk9Q99J95 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk9Q99J95 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk9Q99J95 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.66■□□□□ 0.1
Cdk9Q99J95 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Cdk9Q99J95 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk9Q99J95 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk9Q99J95 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Cdk9Q99J95 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk9Q99J95 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Cdk9Q99J95 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk9Q99J95 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk9Q99J95 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC15.66■□□□□ 0.1
Cdk9Q99J95 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk9Q99J95 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Cdk9Q99J95 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdk9Q99J95 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdk9Q99J95 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdk9Q99J95 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdk9Q99J95 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdk9Q99J95 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdk9Q99J95 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdk9Q99J95 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdk9Q99J95 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cdk9Q99J95 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Cdk9Q99J95 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdk9Q99J95 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cdk9Q99J95 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.65■□□□□ 0.1
Cdk9Q99J95 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdk9Q99J95 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdk9Q99J95 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cdk9Q99J95 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdk9Q99J95 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.65■□□□□ 0.1
Cdk9Q99J95 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdk9Q99J95 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Cdk9Q99J95 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdk9Q99J95 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdk9Q99J95 AC167013.2-201ENSMUST00000228520 2684 ntBASIC15.64■□□□□ 0.09
Cdk9Q99J95 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cdk9Q99J95 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdk9Q99J95 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cdk9Q99J95 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdk9Q99J95 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.64■□□□□ 0.09
Cdk9Q99J95 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.64■□□□□ 0.09
Cdk9Q99J95 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15.64■□□□□ 0.09
Cdk9Q99J95 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.64■□□□□ 0.09
Cdk9Q99J95 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.64■□□□□ 0.09
Cdk9Q99J95 Gm7370-201ENSMUST00000219471 767 ntBASIC15.64■□□□□ 0.09
Cdk9Q99J95 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdk9Q99J95 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cdk9Q99J95 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Cdk9Q99J95 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdk9Q99J95 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdk9Q99J95 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cdk9Q99J95 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cdk9Q99J95 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Cdk9Q99J95 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Cdk9Q99J95 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdk9Q99J95 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Cdk9Q99J95 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdk9Q99J95 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdk9Q99J95 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.63■□□□□ 0.09
Cdk9Q99J95 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Cdk9Q99J95 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdk9Q99J95 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdk9Q99J95 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
Cdk9Q99J95 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cdk9Q99J95 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdk9Q99J95 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdk9Q99J95 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
Cdk9Q99J95 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cdk9Q99J95 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cdk9Q99J95 Gm7889-201ENSMUST00000185591 958 ntBASIC15.63■□□□□ 0.09
Cdk9Q99J95 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdk9Q99J95 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC15.63■□□□□ 0.09
Cdk9Q99J95 AC159205.6-201ENSMUST00000224935 887 ntBASIC15.63■□□□□ 0.09
Cdk9Q99J95 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Cdk9Q99J95 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdk9Q99J95 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.63■□□□□ 0.09
Cdk9Q99J95 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdk9Q99J95 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.63■□□□□ 0.09
Cdk9Q99J95 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdk9Q99J95 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cdk9Q99J95 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdk9Q99J95 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Cdk9Q99J95 Gm43399-201ENSMUST00000202546 2374 ntBASIC15.63■□□□□ 0.09
Cdk9Q99J95 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdk9Q99J95 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdk9Q99J95 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdk9Q99J95 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Cdk9Q99J95 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Cdk9Q99J95 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdk9Q99J95 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Cdk9Q99J95 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdk9Q99J95 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdk9Q99J95 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdk9Q99J95 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.62■□□□□ 0.09
Cdk9Q99J95 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.62■□□□□ 0.09
Cdk9Q99J95 Gm12134-201ENSMUST00000122109 520 ntBASIC15.62■□□□□ 0.09
Cdk9Q99J95 AC121577.1-201ENSMUST00000227302 707 ntBASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms