Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Pcdha9Q91Y11 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.45■□□□□ 0.22
Pcdha9Q91Y11 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdha9Q91Y11 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Pcdha9Q91Y11 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdha9Q91Y11 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdha9Q91Y11 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdha9Q91Y11 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdha9Q91Y11 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.45■□□□□ 0.22
Pcdha9Q91Y11 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdha9Q91Y11 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdha9Q91Y11 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdha9Q91Y11 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdha9Q91Y11 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdha9Q91Y11 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.45■□□□□ 0.22
Pcdha9Q91Y11 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.45■□□□□ 0.22
Pcdha9Q91Y11 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC16.45■□□□□ 0.22
Pcdha9Q91Y11 Mzt1-203ENSMUST00000227948 952 ntBASIC16.45■□□□□ 0.22
Pcdha9Q91Y11 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdha9Q91Y11 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdha9Q91Y11 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.45■□□□□ 0.22
Pcdha9Q91Y11 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Pcdha9Q91Y11 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdha9Q91Y11 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdha9Q91Y11 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdha9Q91Y11 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.45■□□□□ 0.22
Pcdha9Q91Y11 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Pcdha9Q91Y11 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.45■□□□□ 0.22
Pcdha9Q91Y11 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdha9Q91Y11 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdha9Q91Y11 Asic1-205ENSMUST00000228185 1818 ntBASIC16.45■□□□□ 0.22
Pcdha9Q91Y11 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.45■□□□□ 0.22
Pcdha9Q91Y11 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha9Q91Y11 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha9Q91Y11 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha9Q91Y11 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.44■□□□□ 0.22
Pcdha9Q91Y11 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Pcdha9Q91Y11 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Pcdha9Q91Y11 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha9Q91Y11 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.44■□□□□ 0.22
Pcdha9Q91Y11 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha9Q91Y11 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha9Q91Y11 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha9Q91Y11 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha9Q91Y11 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.44■□□□□ 0.22
Pcdha9Q91Y11 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC16.44■□□□□ 0.22
Pcdha9Q91Y11 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha9Q91Y11 Gm7461-201ENSMUST00000058918 827 ntBASIC16.44■□□□□ 0.22
Pcdha9Q91Y11 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Pcdha9Q91Y11 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Pcdha9Q91Y11 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
Pcdha9Q91Y11 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha9Q91Y11 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha9Q91Y11 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha9Q91Y11 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha9Q91Y11 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha9Q91Y11 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdha9Q91Y11 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdha9Q91Y11 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdha9Q91Y11 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdha9Q91Y11 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdha9Q91Y11 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdha9Q91Y11 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Pcdha9Q91Y11 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdha9Q91Y11 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.43■□□□□ 0.22
Pcdha9Q91Y11 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdha9Q91Y11 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.43■□□□□ 0.22
Pcdha9Q91Y11 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.43■□□□□ 0.22
Pcdha9Q91Y11 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdha9Q91Y11 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdha9Q91Y11 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdha9Q91Y11 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdha9Q91Y11 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdha9Q91Y11 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdha9Q91Y11 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdha9Q91Y11 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdha9Q91Y11 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdha9Q91Y11 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdha9Q91Y11 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdha9Q91Y11 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdha9Q91Y11 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdha9Q91Y11 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
Pcdha9Q91Y11 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdha9Q91Y11 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdha9Q91Y11 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Pcdha9Q91Y11 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdha9Q91Y11 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdha9Q91Y11 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdha9Q91Y11 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdha9Q91Y11 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdha9Q91Y11 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Pcdha9Q91Y11 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdha9Q91Y11 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdha9Q91Y11 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Pcdha9Q91Y11 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdha9Q91Y11 Mir5131-201ENSMUST00000175426 93 ntBASIC16.42■□□□□ 0.22
Pcdha9Q91Y11 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC16.42■□□□□ 0.22
Pcdha9Q91Y11 Gm9682-201ENSMUST00000197505 556 ntBASIC16.42■□□□□ 0.22
Pcdha9Q91Y11 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.42■□□□□ 0.22
Pcdha9Q91Y11 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms