Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb6Q91XZ4 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.91■□□□□ 0.14
Pcdhb6Q91XZ4 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Pcdhb6Q91XZ4 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb6Q91XZ4 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.91■□□□□ 0.14
Pcdhb6Q91XZ4 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb6Q91XZ4 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb6Q91XZ4 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb6Q91XZ4 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb6Q91XZ4 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb6Q91XZ4 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb6Q91XZ4 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Pcdhb6Q91XZ4 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Pcdhb6Q91XZ4 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb6Q91XZ4 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Pcdhb6Q91XZ4 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb6Q91XZ4 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb6Q91XZ4 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb6Q91XZ4 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Pcdhb6Q91XZ4 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb6Q91XZ4 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb6Q91XZ4 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb6Q91XZ4 Gm24589-201ENSMUST00000116692 94 ntBASIC15.9■□□□□ 0.14
Pcdhb6Q91XZ4 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.9■□□□□ 0.14
Pcdhb6Q91XZ4 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.9■□□□□ 0.14
Pcdhb6Q91XZ4 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb6Q91XZ4 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.9■□□□□ 0.14
Pcdhb6Q91XZ4 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.9■□□□□ 0.14
Pcdhb6Q91XZ4 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb6Q91XZ4 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb6Q91XZ4 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Pcdhb6Q91XZ4 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb6Q91XZ4 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb6Q91XZ4 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb6Q91XZ4 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb6Q91XZ4 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb6Q91XZ4 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb6Q91XZ4 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb6Q91XZ4 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb6Q91XZ4 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb6Q91XZ4 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
Pcdhb6Q91XZ4 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb6Q91XZ4 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb6Q91XZ4 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.89■□□□□ 0.13
Pcdhb6Q91XZ4 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.89■□□□□ 0.13
Pcdhb6Q91XZ4 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb6Q91XZ4 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Pcdhb6Q91XZ4 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb6Q91XZ4 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb6Q91XZ4 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.89■□□□□ 0.13
Pcdhb6Q91XZ4 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.89■□□□□ 0.13
Pcdhb6Q91XZ4 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Pcdhb6Q91XZ4 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.89■□□□□ 0.13
Pcdhb6Q91XZ4 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb6Q91XZ4 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb6Q91XZ4 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Pcdhb6Q91XZ4 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb6Q91XZ4 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb6Q91XZ4 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb6Q91XZ4 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb6Q91XZ4 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb6Q91XZ4 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb6Q91XZ4 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb6Q91XZ4 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb6Q91XZ4 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb6Q91XZ4 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb6Q91XZ4 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Pcdhb6Q91XZ4 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb6Q91XZ4 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb6Q91XZ4 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb6Q91XZ4 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb6Q91XZ4 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb6Q91XZ4 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb6Q91XZ4 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.88■□□□□ 0.13
Pcdhb6Q91XZ4 Gm8318-201ENSMUST00000182954 872 ntBASIC15.88■□□□□ 0.13
Pcdhb6Q91XZ4 Gm6089-201ENSMUST00000197666 938 ntBASIC15.88■□□□□ 0.13
Pcdhb6Q91XZ4 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.88■□□□□ 0.13
Pcdhb6Q91XZ4 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.88■□□□□ 0.13
Pcdhb6Q91XZ4 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.88■□□□□ 0.13
Pcdhb6Q91XZ4 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Pcdhb6Q91XZ4 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb6Q91XZ4 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.88■□□□□ 0.13
Pcdhb6Q91XZ4 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb6Q91XZ4 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Pcdhb6Q91XZ4 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.88■□□□□ 0.13
Pcdhb6Q91XZ4 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.88■□□□□ 0.13
Pcdhb6Q91XZ4 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb6Q91XZ4 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb6Q91XZ4 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.88■□□□□ 0.13
Pcdhb6Q91XZ4 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb6Q91XZ4 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.88■□□□□ 0.13
Pcdhb6Q91XZ4 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb6Q91XZ4 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb6Q91XZ4 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb6Q91XZ4 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.87■□□□□ 0.13
Pcdhb6Q91XZ4 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb6Q91XZ4 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb6Q91XZ4 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb6Q91XZ4 Grk6-207ENSMUST00000225925 2769 ntBASIC15.87■□□□□ 0.13
Pcdhb6Q91XZ4 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms