Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Pcdhga11Q91XY8 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhga11Q91XY8 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Pcdhga11Q91XY8 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhga11Q91XY8 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhga11Q91XY8 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhga11Q91XY8 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhga11Q91XY8 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhga11Q91XY8 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhga11Q91XY8 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Pcdhga11Q91XY8 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhga11Q91XY8 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhga11Q91XY8 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhga11Q91XY8 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Pcdhga11Q91XY8 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.97□□□□□ -0.01
Pcdhga11Q91XY8 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhga11Q91XY8 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Pcdhga11Q91XY8 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhga11Q91XY8 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.97□□□□□ -0.01
Pcdhga11Q91XY8 Gm27357-201ENSMUST00000183754 135 ntBASIC14.97□□□□□ -0.01
Pcdhga11Q91XY8 Gm28033-201ENSMUST00000184224 96 ntBASIC14.97□□□□□ -0.01
Pcdhga11Q91XY8 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhga11Q91XY8 Gm9172-201ENSMUST00000212092 954 ntBASIC14.97□□□□□ -0.01
Pcdhga11Q91XY8 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.97□□□□□ -0.01
Pcdhga11Q91XY8 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhga11Q91XY8 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Pcdhga11Q91XY8 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Pcdhga11Q91XY8 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Pcdhga11Q91XY8 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhga11Q91XY8 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhga11Q91XY8 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhga11Q91XY8 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhga11Q91XY8 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhga11Q91XY8 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhga11Q91XY8 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhga11Q91XY8 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.97□□□□□ -0.01
Pcdhga11Q91XY8 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhga11Q91XY8 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhga11Q91XY8 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhga11Q91XY8 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Pcdhga11Q91XY8 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhga11Q91XY8 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Pcdhga11Q91XY8 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhga11Q91XY8 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhga11Q91XY8 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhga11Q91XY8 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhga11Q91XY8 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhga11Q91XY8 Gm17971-201ENSMUST00000190239 806 ntBASIC14.96□□□□□ -0.01
Pcdhga11Q91XY8 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhga11Q91XY8 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.96□□□□□ -0.01
Pcdhga11Q91XY8 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhga11Q91XY8 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhga11Q91XY8 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhga11Q91XY8 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Pcdhga11Q91XY8 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdhga11Q91XY8 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdhga11Q91XY8 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Pcdhga11Q91XY8 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdhga11Q91XY8 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdhga11Q91XY8 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdhga11Q91XY8 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdhga11Q91XY8 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdhga11Q91XY8 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
Pcdhga11Q91XY8 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhga11Q91XY8 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhga11Q91XY8 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhga11Q91XY8 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Pcdhga11Q91XY8 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.95□□□□□ -0.02
Pcdhga11Q91XY8 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhga11Q91XY8 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhga11Q91XY8 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhga11Q91XY8 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.95□□□□□ -0.02
Pcdhga11Q91XY8 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhga11Q91XY8 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.95□□□□□ -0.02
Pcdhga11Q91XY8 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.95□□□□□ -0.02
Pcdhga11Q91XY8 Olfr129-201ENSMUST00000122318 993 ntBASIC14.95□□□□□ -0.02
Pcdhga11Q91XY8 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.95□□□□□ -0.02
Pcdhga11Q91XY8 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Pcdhga11Q91XY8 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhga11Q91XY8 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhga11Q91XY8 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhga11Q91XY8 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhga11Q91XY8 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
Pcdhga11Q91XY8 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhga11Q91XY8 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Pcdhga11Q91XY8 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhga11Q91XY8 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhga11Q91XY8 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhga11Q91XY8 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Pcdhga11Q91XY8 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhga11Q91XY8 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.95□□□□□ -0.02
Pcdhga11Q91XY8 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhga11Q91XY8 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhga11Q91XY8 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhga11Q91XY8 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhga11Q91XY8 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhga11Q91XY8 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.95□□□□□ -0.02
Pcdhga11Q91XY8 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhga11Q91XY8 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhga11Q91XY8 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms