Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Ddx41Q91VN6 Gm8000-201ENSMUST00000188378 592 ntBASIC17.76■□□□□ 0.43
Ddx41Q91VN6 Gm43332-201ENSMUST00000202511 1044 ntBASIC17.76■□□□□ 0.43
Ddx41Q91VN6 AC154222.1-201ENSMUST00000223882 475 ntBASIC17.76■□□□□ 0.43
Ddx41Q91VN6 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ddx41Q91VN6 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.76■□□□□ 0.43
Ddx41Q91VN6 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ddx41Q91VN6 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC17.76■□□□□ 0.43
Ddx41Q91VN6 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ddx41Q91VN6 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ddx41Q91VN6 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Ddx41Q91VN6 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ddx41Q91VN6 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ddx41Q91VN6 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Ddx41Q91VN6 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ddx41Q91VN6 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx41Q91VN6 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx41Q91VN6 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx41Q91VN6 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx41Q91VN6 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17.75■□□□□ 0.43
Ddx41Q91VN6 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx41Q91VN6 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx41Q91VN6 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx41Q91VN6 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.75■□□□□ 0.43
Ddx41Q91VN6 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx41Q91VN6 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx41Q91VN6 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx41Q91VN6 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Ddx41Q91VN6 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx41Q91VN6 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.75■□□□□ 0.43
Ddx41Q91VN6 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.75■□□□□ 0.43
Ddx41Q91VN6 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC17.75■□□□□ 0.43
Ddx41Q91VN6 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.75■□□□□ 0.43
Ddx41Q91VN6 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.75■□□□□ 0.43
Ddx41Q91VN6 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.75■□□□□ 0.43
Ddx41Q91VN6 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.75■□□□□ 0.43
Ddx41Q91VN6 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx41Q91VN6 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.75■□□□□ 0.43
Ddx41Q91VN6 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.75■□□□□ 0.43
Ddx41Q91VN6 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.75■□□□□ 0.43
Ddx41Q91VN6 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.75■□□□□ 0.43
Ddx41Q91VN6 Gm8825-201ENSMUST00000182565 998 ntBASIC17.75■□□□□ 0.43
Ddx41Q91VN6 Gm4518-201ENSMUST00000182638 718 ntBASIC17.75■□□□□ 0.43
Ddx41Q91VN6 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.75■□□□□ 0.43
Ddx41Q91VN6 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.75■□□□□ 0.43
Ddx41Q91VN6 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.75■□□□□ 0.43
Ddx41Q91VN6 Gm37935-201ENSMUST00000192012 982 ntBASIC17.75■□□□□ 0.43
Ddx41Q91VN6 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx41Q91VN6 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx41Q91VN6 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.75■□□□□ 0.43
Ddx41Q91VN6 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.75■□□□□ 0.43
Ddx41Q91VN6 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx41Q91VN6 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx41Q91VN6 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx41Q91VN6 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx41Q91VN6 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx41Q91VN6 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx41Q91VN6 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx41Q91VN6 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx41Q91VN6 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Ddx41Q91VN6 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx41Q91VN6 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Ddx41Q91VN6 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx41Q91VN6 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Ddx41Q91VN6 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ddx41Q91VN6 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ddx41Q91VN6 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Ddx41Q91VN6 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ddx41Q91VN6 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ddx41Q91VN6 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ddx41Q91VN6 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ddx41Q91VN6 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ddx41Q91VN6 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ddx41Q91VN6 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ddx41Q91VN6 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ddx41Q91VN6 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ddx41Q91VN6 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC17.74■□□□□ 0.43
Ddx41Q91VN6 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC17.74■□□□□ 0.43
Ddx41Q91VN6 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ddx41Q91VN6 Gm27628-201ENSMUST00000184911 107 ntBASIC17.74■□□□□ 0.43
Ddx41Q91VN6 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.74■□□□□ 0.43
Ddx41Q91VN6 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.74■□□□□ 0.43
Ddx41Q91VN6 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Ddx41Q91VN6 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ddx41Q91VN6 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ddx41Q91VN6 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Ddx41Q91VN6 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC17.74■□□□□ 0.43
Ddx41Q91VN6 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ddx41Q91VN6 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ddx41Q91VN6 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ddx41Q91VN6 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ddx41Q91VN6 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ddx41Q91VN6 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Ddx41Q91VN6 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ddx41Q91VN6 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ddx41Q91VN6 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Ddx41Q91VN6 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ddx41Q91VN6 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ddx41Q91VN6 Gm7222-201ENSMUST00000117512 906 ntBASIC17.73■□□□□ 0.43
Ddx41Q91VN6 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms