Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Tram1Q91V04 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tram1Q91V04 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Tram1Q91V04 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tram1Q91V04 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tram1Q91V04 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Tram1Q91V04 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Tram1Q91V04 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Tram1Q91V04 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC13.35□□□□□ -0.27
Tram1Q91V04 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tram1Q91V04 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tram1Q91V04 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tram1Q91V04 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.34□□□□□ -0.27
Tram1Q91V04 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tram1Q91V04 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tram1Q91V04 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tram1Q91V04 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tram1Q91V04 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tram1Q91V04 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tram1Q91V04 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tram1Q91V04 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Tram1Q91V04 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tram1Q91V04 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tram1Q91V04 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Tram1Q91V04 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tram1Q91V04 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC13.34□□□□□ -0.27
Tram1Q91V04 Gm3375-201ENSMUST00000203929 796 ntBASIC13.34□□□□□ -0.27
Tram1Q91V04 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tram1Q91V04 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tram1Q91V04 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tram1Q91V04 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tram1Q91V04 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tram1Q91V04 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tram1Q91V04 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Tram1Q91V04 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tram1Q91V04 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tram1Q91V04 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Tram1Q91V04 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.34□□□□□ -0.27
Tram1Q91V04 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Tram1Q91V04 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Tram1Q91V04 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Tram1Q91V04 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC13.33□□□□□ -0.27
Tram1Q91V04 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.33□□□□□ -0.27
Tram1Q91V04 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tram1Q91V04 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tram1Q91V04 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tram1Q91V04 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tram1Q91V04 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tram1Q91V04 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tram1Q91V04 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Tram1Q91V04 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tram1Q91V04 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tram1Q91V04 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tram1Q91V04 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC13.33□□□□□ -0.28
Tram1Q91V04 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC13.33□□□□□ -0.28
Tram1Q91V04 AC135637.1-201ENSMUST00000227750 365 ntBASIC13.33□□□□□ -0.28
Tram1Q91V04 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tram1Q91V04 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tram1Q91V04 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tram1Q91V04 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tram1Q91V04 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tram1Q91V04 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tram1Q91V04 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tram1Q91V04 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tram1Q91V04 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC13.33□□□□□ -0.28
Tram1Q91V04 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tram1Q91V04 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tram1Q91V04 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tram1Q91V04 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tram1Q91V04 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tram1Q91V04 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tram1Q91V04 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tram1Q91V04 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tram1Q91V04 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tram1Q91V04 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tram1Q91V04 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tram1Q91V04 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Tram1Q91V04 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tram1Q91V04 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Tram1Q91V04 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Tram1Q91V04 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tram1Q91V04 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tram1Q91V04 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tram1Q91V04 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tram1Q91V04 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC13.32□□□□□ -0.28
Tram1Q91V04 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Tram1Q91V04 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tram1Q91V04 Gm43353-201ENSMUST00000199224 1295 ntBASIC13.32□□□□□ -0.28
Tram1Q91V04 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC13.32□□□□□ -0.28
Tram1Q91V04 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC13.32□□□□□ -0.28
Tram1Q91V04 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tram1Q91V04 Otx2os1-204ENSMUST00000227221 751 ntBASIC13.32□□□□□ -0.28
Tram1Q91V04 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tram1Q91V04 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tram1Q91V04 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tram1Q91V04 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Tram1Q91V04 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Tram1Q91V04 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tram1Q91V04 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tram1Q91V04 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms