Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
H1fooQ8VIK3 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
H1fooQ8VIK3 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC13□□□□□ -0.33
H1fooQ8VIK3 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
H1fooQ8VIK3 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
H1fooQ8VIK3 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13□□□□□ -0.33
H1fooQ8VIK3 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
H1fooQ8VIK3 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
H1fooQ8VIK3 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
H1fooQ8VIK3 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC13□□□□□ -0.33
H1fooQ8VIK3 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
H1fooQ8VIK3 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
H1fooQ8VIK3 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC13□□□□□ -0.33
H1fooQ8VIK3 Gm15165-201ENSMUST00000118140 502 ntBASIC13□□□□□ -0.33
H1fooQ8VIK3 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
H1fooQ8VIK3 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
H1fooQ8VIK3 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
H1fooQ8VIK3 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
H1fooQ8VIK3 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC13□□□□□ -0.33
H1fooQ8VIK3 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC13□□□□□ -0.33
H1fooQ8VIK3 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC13□□□□□ -0.33
H1fooQ8VIK3 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13□□□□□ -0.33
H1fooQ8VIK3 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC13□□□□□ -0.33
H1fooQ8VIK3 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC13□□□□□ -0.33
H1fooQ8VIK3 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
H1fooQ8VIK3 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
H1fooQ8VIK3 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
H1fooQ8VIK3 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13□□□□□ -0.33
H1fooQ8VIK3 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
H1fooQ8VIK3 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
H1fooQ8VIK3 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13□□□□□ -0.33
H1fooQ8VIK3 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
H1fooQ8VIK3 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
H1fooQ8VIK3 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
H1fooQ8VIK3 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
H1fooQ8VIK3 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
H1fooQ8VIK3 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
H1fooQ8VIK3 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
H1fooQ8VIK3 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
H1fooQ8VIK3 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
H1fooQ8VIK3 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
H1fooQ8VIK3 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.99□□□□□ -0.33
H1fooQ8VIK3 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
H1fooQ8VIK3 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
H1fooQ8VIK3 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.99□□□□□ -0.33
H1fooQ8VIK3 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC12.99□□□□□ -0.33
H1fooQ8VIK3 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC12.99□□□□□ -0.33
H1fooQ8VIK3 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC12.99□□□□□ -0.33
H1fooQ8VIK3 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
H1fooQ8VIK3 AC127302.2-201ENSMUST00000215212 268 ntBASIC12.99□□□□□ -0.33
H1fooQ8VIK3 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC12.99□□□□□ -0.33
H1fooQ8VIK3 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
H1fooQ8VIK3 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
H1fooQ8VIK3 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
H1fooQ8VIK3 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
H1fooQ8VIK3 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
H1fooQ8VIK3 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
H1fooQ8VIK3 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
H1fooQ8VIK3 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
H1fooQ8VIK3 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
H1fooQ8VIK3 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
H1fooQ8VIK3 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
H1fooQ8VIK3 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
H1fooQ8VIK3 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
H1fooQ8VIK3 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H1fooQ8VIK3 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H1fooQ8VIK3 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H1fooQ8VIK3 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
H1fooQ8VIK3 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H1fooQ8VIK3 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC12.98□□□□□ -0.33
H1fooQ8VIK3 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H1fooQ8VIK3 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H1fooQ8VIK3 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC12.98□□□□□ -0.33
H1fooQ8VIK3 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H1fooQ8VIK3 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H1fooQ8VIK3 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
H1fooQ8VIK3 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
H1fooQ8VIK3 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC12.98□□□□□ -0.33
H1fooQ8VIK3 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H1fooQ8VIK3 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H1fooQ8VIK3 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H1fooQ8VIK3 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
H1fooQ8VIK3 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
H1fooQ8VIK3 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H1fooQ8VIK3 Gm25745-201ENSMUST00000174945 133 ntBASIC12.98□□□□□ -0.33
H1fooQ8VIK3 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
H1fooQ8VIK3 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H1fooQ8VIK3 Vti1a-206ENSMUST00000225529 1244 ntBASIC12.98□□□□□ -0.33
H1fooQ8VIK3 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H1fooQ8VIK3 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC12.98□□□□□ -0.33
H1fooQ8VIK3 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H1fooQ8VIK3 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
H1fooQ8VIK3 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H1fooQ8VIK3 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H1fooQ8VIK3 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H1fooQ8VIK3 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H1fooQ8VIK3 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.98□□□□□ -0.33
H1fooQ8VIK3 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
H1fooQ8VIK3 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H1fooQ8VIK3 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms