Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TraipQ8VIG6 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TraipQ8VIG6 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TraipQ8VIG6 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC16.44■□□□□ 0.22
TraipQ8VIG6 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TraipQ8VIG6 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TraipQ8VIG6 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC16.44■□□□□ 0.22
TraipQ8VIG6 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TraipQ8VIG6 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TraipQ8VIG6 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TraipQ8VIG6 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TraipQ8VIG6 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TraipQ8VIG6 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
TraipQ8VIG6 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TraipQ8VIG6 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TraipQ8VIG6 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.44■□□□□ 0.22
TraipQ8VIG6 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TraipQ8VIG6 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TraipQ8VIG6 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TraipQ8VIG6 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TraipQ8VIG6 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC16.43■□□□□ 0.22
TraipQ8VIG6 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TraipQ8VIG6 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TraipQ8VIG6 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TraipQ8VIG6 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC16.43■□□□□ 0.22
TraipQ8VIG6 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TraipQ8VIG6 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TraipQ8VIG6 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TraipQ8VIG6 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TraipQ8VIG6 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC16.43■□□□□ 0.22
TraipQ8VIG6 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
TraipQ8VIG6 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC16.43■□□□□ 0.22
TraipQ8VIG6 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TraipQ8VIG6 AC124549.3-201ENSMUST00000225541 367 ntBASIC16.43■□□□□ 0.22
TraipQ8VIG6 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
TraipQ8VIG6 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.43■□□□□ 0.22
TraipQ8VIG6 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
TraipQ8VIG6 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TraipQ8VIG6 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TraipQ8VIG6 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.43■□□□□ 0.22
TraipQ8VIG6 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TraipQ8VIG6 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TraipQ8VIG6 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TraipQ8VIG6 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
TraipQ8VIG6 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TraipQ8VIG6 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TraipQ8VIG6 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TraipQ8VIG6 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TraipQ8VIG6 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TraipQ8VIG6 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TraipQ8VIG6 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
TraipQ8VIG6 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TraipQ8VIG6 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC16.42■□□□□ 0.22
TraipQ8VIG6 Gm8396-201ENSMUST00000057361 823 ntBASIC16.42■□□□□ 0.22
TraipQ8VIG6 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
TraipQ8VIG6 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TraipQ8VIG6 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TraipQ8VIG6 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.42■□□□□ 0.22
TraipQ8VIG6 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TraipQ8VIG6 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TraipQ8VIG6 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TraipQ8VIG6 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TraipQ8VIG6 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TraipQ8VIG6 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TraipQ8VIG6 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TraipQ8VIG6 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.41■□□□□ 0.22
TraipQ8VIG6 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TraipQ8VIG6 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TraipQ8VIG6 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TraipQ8VIG6 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TraipQ8VIG6 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TraipQ8VIG6 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TraipQ8VIG6 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC16.41■□□□□ 0.22
TraipQ8VIG6 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TraipQ8VIG6 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC16.41■□□□□ 0.22
TraipQ8VIG6 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TraipQ8VIG6 Gm10499-201ENSMUST00000174094 934 ntBASIC16.41■□□□□ 0.22
TraipQ8VIG6 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC16.41■□□□□ 0.22
TraipQ8VIG6 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC16.41■□□□□ 0.22
TraipQ8VIG6 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC16.41■□□□□ 0.22
TraipQ8VIG6 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TraipQ8VIG6 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TraipQ8VIG6 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TraipQ8VIG6 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TraipQ8VIG6 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TraipQ8VIG6 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
TraipQ8VIG6 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
TraipQ8VIG6 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.41■□□□□ 0.22
TraipQ8VIG6 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
TraipQ8VIG6 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TraipQ8VIG6 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
TraipQ8VIG6 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TraipQ8VIG6 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16.41■□□□□ 0.22
TraipQ8VIG6 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TraipQ8VIG6 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TraipQ8VIG6 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
TraipQ8VIG6 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.41■□□□□ 0.22
TraipQ8VIG6 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TraipQ8VIG6 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TraipQ8VIG6 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms