Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Odf4Q8VI88 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.91□□□□□ -0.18
Odf4Q8VI88 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Odf4Q8VI88 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Odf4Q8VI88 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Odf4Q8VI88 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Odf4Q8VI88 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
Odf4Q8VI88 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Odf4Q8VI88 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Odf4Q8VI88 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Odf4Q8VI88 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Odf4Q8VI88 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.9□□□□□ -0.18
Odf4Q8VI88 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC13.9□□□□□ -0.18
Odf4Q8VI88 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Odf4Q8VI88 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Odf4Q8VI88 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Odf4Q8VI88 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Odf4Q8VI88 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Odf4Q8VI88 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Odf4Q8VI88 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Odf4Q8VI88 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Odf4Q8VI88 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Odf4Q8VI88 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Odf4Q8VI88 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Odf4Q8VI88 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Odf4Q8VI88 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Odf4Q8VI88 Gm11452-201ENSMUST00000122376 690 ntBASIC13.9□□□□□ -0.18
Odf4Q8VI88 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Odf4Q8VI88 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Odf4Q8VI88 Gm10052-201ENSMUST00000168019 960 ntBASIC13.9□□□□□ -0.18
Odf4Q8VI88 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC13.9□□□□□ -0.18
Odf4Q8VI88 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Odf4Q8VI88 Gm7729-201ENSMUST00000050143 801 ntBASIC13.9□□□□□ -0.18
Odf4Q8VI88 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Odf4Q8VI88 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Odf4Q8VI88 Zfp264-201ENSMUST00000208656 1563 ntBASIC13.9□□□□□ -0.18
Odf4Q8VI88 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Odf4Q8VI88 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Odf4Q8VI88 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Odf4Q8VI88 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Odf4Q8VI88 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Odf4Q8VI88 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Odf4Q8VI88 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Odf4Q8VI88 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Odf4Q8VI88 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
Odf4Q8VI88 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Odf4Q8VI88 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Odf4Q8VI88 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Odf4Q8VI88 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Odf4Q8VI88 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Odf4Q8VI88 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.89□□□□□ -0.19
Odf4Q8VI88 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Odf4Q8VI88 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Odf4Q8VI88 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Odf4Q8VI88 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Odf4Q8VI88 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Odf4Q8VI88 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.89□□□□□ -0.19
Odf4Q8VI88 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Odf4Q8VI88 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Odf4Q8VI88 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Odf4Q8VI88 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Odf4Q8VI88 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC13.89□□□□□ -0.19
Odf4Q8VI88 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC13.89□□□□□ -0.19
Odf4Q8VI88 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Odf4Q8VI88 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Odf4Q8VI88 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Odf4Q8VI88 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC13.89□□□□□ -0.19
Odf4Q8VI88 AC164629.2-201ENSMUST00000217916 270 ntBASIC13.89□□□□□ -0.19
Odf4Q8VI88 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Odf4Q8VI88 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Odf4Q8VI88 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Odf4Q8VI88 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13.89□□□□□ -0.19
Odf4Q8VI88 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Odf4Q8VI88 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Odf4Q8VI88 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Odf4Q8VI88 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Odf4Q8VI88 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Odf4Q8VI88 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Odf4Q8VI88 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Odf4Q8VI88 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Odf4Q8VI88 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Odf4Q8VI88 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Odf4Q8VI88 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Odf4Q8VI88 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Odf4Q8VI88 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Odf4Q8VI88 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Odf4Q8VI88 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Odf4Q8VI88 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
Odf4Q8VI88 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Odf4Q8VI88 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Odf4Q8VI88 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Odf4Q8VI88 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Odf4Q8VI88 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Odf4Q8VI88 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Odf4Q8VI88 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Odf4Q8VI88 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Odf4Q8VI88 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC13.88□□□□□ -0.19
Odf4Q8VI88 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13.88□□□□□ -0.19
Odf4Q8VI88 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Odf4Q8VI88 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms