Protein–RNA interactions for Protein: Q8VCS3

Fam20b, Glycosaminoglycan xylosylkinase, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam20bQ8VCS3 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Fam20bQ8VCS3 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Fam20bQ8VCS3 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Fam20bQ8VCS3 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Fam20bQ8VCS3 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Fam20bQ8VCS3 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fam20bQ8VCS3 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fam20bQ8VCS3 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fam20bQ8VCS3 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fam20bQ8VCS3 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Fam20bQ8VCS3 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Fam20bQ8VCS3 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Fam20bQ8VCS3 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fam20bQ8VCS3 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Fam20bQ8VCS3 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fam20bQ8VCS3 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.44□□□□□ -0.1
Fam20bQ8VCS3 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Fam20bQ8VCS3 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fam20bQ8VCS3 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Fam20bQ8VCS3 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Fam20bQ8VCS3 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fam20bQ8VCS3 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.44□□□□□ -0.1
Fam20bQ8VCS3 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC14.44□□□□□ -0.1
Fam20bQ8VCS3 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.44□□□□□ -0.1
Fam20bQ8VCS3 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Fam20bQ8VCS3 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Fam20bQ8VCS3 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fam20bQ8VCS3 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC14.44□□□□□ -0.1
Fam20bQ8VCS3 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fam20bQ8VCS3 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Fam20bQ8VCS3 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fam20bQ8VCS3 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fam20bQ8VCS3 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fam20bQ8VCS3 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fam20bQ8VCS3 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fam20bQ8VCS3 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Fam20bQ8VCS3 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fam20bQ8VCS3 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fam20bQ8VCS3 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fam20bQ8VCS3 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fam20bQ8VCS3 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Fam20bQ8VCS3 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fam20bQ8VCS3 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fam20bQ8VCS3 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.44□□□□□ -0.1
Fam20bQ8VCS3 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Fam20bQ8VCS3 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Fam20bQ8VCS3 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Fam20bQ8VCS3 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Fam20bQ8VCS3 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Fam20bQ8VCS3 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Fam20bQ8VCS3 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Fam20bQ8VCS3 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Fam20bQ8VCS3 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Fam20bQ8VCS3 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Fam20bQ8VCS3 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Fam20bQ8VCS3 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Fam20bQ8VCS3 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Fam20bQ8VCS3 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Fam20bQ8VCS3 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC14.43□□□□□ -0.1
Fam20bQ8VCS3 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Fam20bQ8VCS3 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Fam20bQ8VCS3 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Fam20bQ8VCS3 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Fam20bQ8VCS3 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Fam20bQ8VCS3 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Fam20bQ8VCS3 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Fam20bQ8VCS3 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Fam20bQ8VCS3 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Fam20bQ8VCS3 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Fam20bQ8VCS3 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.42□□□□□ -0.1
Fam20bQ8VCS3 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Fam20bQ8VCS3 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Fam20bQ8VCS3 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Fam20bQ8VCS3 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Fam20bQ8VCS3 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.42□□□□□ -0.1
Fam20bQ8VCS3 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Fam20bQ8VCS3 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Fam20bQ8VCS3 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Fam20bQ8VCS3 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Fam20bQ8VCS3 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Fam20bQ8VCS3 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Fam20bQ8VCS3 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Fam20bQ8VCS3 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Fam20bQ8VCS3 Gm27463-201ENSMUST00000183569 57 ntBASIC14.42□□□□□ -0.1
Fam20bQ8VCS3 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Fam20bQ8VCS3 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Fam20bQ8VCS3 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Fam20bQ8VCS3 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
Fam20bQ8VCS3 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Fam20bQ8VCS3 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Fam20bQ8VCS3 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Fam20bQ8VCS3 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Fam20bQ8VCS3 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Fam20bQ8VCS3 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Fam20bQ8VCS3 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Fam20bQ8VCS3 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Fam20bQ8VCS3 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Fam20bQ8VCS3 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.42□□□□□ -0.1
Fam20bQ8VCS3 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Fam20bQ8VCS3 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms