Protein–RNA interactions for Protein: Q8VCQ6

Sgms1, Phosphatidylcholine:ceramide cholinephosphotransferase 1, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgms1Q8VCQ6 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.71■□□□□ 0.27
Sgms1Q8VCQ6 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sgms1Q8VCQ6 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Sgms1Q8VCQ6 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sgms1Q8VCQ6 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sgms1Q8VCQ6 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sgms1Q8VCQ6 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Sgms1Q8VCQ6 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sgms1Q8VCQ6 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sgms1Q8VCQ6 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Sgms1Q8VCQ6 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.71■□□□□ 0.27
Sgms1Q8VCQ6 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sgms1Q8VCQ6 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sgms1Q8VCQ6 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Sgms1Q8VCQ6 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sgms1Q8VCQ6 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sgms1Q8VCQ6 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sgms1Q8VCQ6 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sgms1Q8VCQ6 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sgms1Q8VCQ6 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sgms1Q8VCQ6 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sgms1Q8VCQ6 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sgms1Q8VCQ6 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.7■□□□□ 0.26
Sgms1Q8VCQ6 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Sgms1Q8VCQ6 Gm11780-201ENSMUST00000136880 516 ntBASIC16.7■□□□□ 0.26
Sgms1Q8VCQ6 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.7■□□□□ 0.26
Sgms1Q8VCQ6 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sgms1Q8VCQ6 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.7■□□□□ 0.26
Sgms1Q8VCQ6 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sgms1Q8VCQ6 Gm44771-201ENSMUST00000206975 626 ntBASIC16.7■□□□□ 0.26
Sgms1Q8VCQ6 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.7■□□□□ 0.26
Sgms1Q8VCQ6 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.7■□□□□ 0.26
Sgms1Q8VCQ6 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Sgms1Q8VCQ6 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sgms1Q8VCQ6 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sgms1Q8VCQ6 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sgms1Q8VCQ6 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sgms1Q8VCQ6 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sgms1Q8VCQ6 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Sgms1Q8VCQ6 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sgms1Q8VCQ6 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Sgms1Q8VCQ6 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
Sgms1Q8VCQ6 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sgms1Q8VCQ6 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sgms1Q8VCQ6 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.7■□□□□ 0.26
Sgms1Q8VCQ6 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sgms1Q8VCQ6 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sgms1Q8VCQ6 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sgms1Q8VCQ6 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sgms1Q8VCQ6 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Sgms1Q8VCQ6 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Sgms1Q8VCQ6 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sgms1Q8VCQ6 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sgms1Q8VCQ6 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sgms1Q8VCQ6 Gm13884-201ENSMUST00000118103 829 ntBASIC16.69■□□□□ 0.26
Sgms1Q8VCQ6 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.69■□□□□ 0.26
Sgms1Q8VCQ6 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Sgms1Q8VCQ6 Gm27646-201ENSMUST00000183989 110 ntBASIC16.69■□□□□ 0.26
Sgms1Q8VCQ6 Mir8098-201ENSMUST00000184011 137 ntBASIC16.69■□□□□ 0.26
Sgms1Q8VCQ6 AC122024.2-201ENSMUST00000220086 871 ntBASIC16.69■□□□□ 0.26
Sgms1Q8VCQ6 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sgms1Q8VCQ6 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sgms1Q8VCQ6 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sgms1Q8VCQ6 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sgms1Q8VCQ6 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC16.69■□□□□ 0.26
Sgms1Q8VCQ6 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Sgms1Q8VCQ6 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sgms1Q8VCQ6 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sgms1Q8VCQ6 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sgms1Q8VCQ6 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.68■□□□□ 0.26
Sgms1Q8VCQ6 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Sgms1Q8VCQ6 Grk6-207ENSMUST00000225925 2769 ntBASIC16.68■□□□□ 0.26
Sgms1Q8VCQ6 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Sgms1Q8VCQ6 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sgms1Q8VCQ6 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Sgms1Q8VCQ6 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC16.68■□□□□ 0.26
Sgms1Q8VCQ6 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sgms1Q8VCQ6 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sgms1Q8VCQ6 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Sgms1Q8VCQ6 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sgms1Q8VCQ6 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sgms1Q8VCQ6 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Sgms1Q8VCQ6 Gm8318-201ENSMUST00000182954 872 ntBASIC16.68■□□□□ 0.26
Sgms1Q8VCQ6 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC16.68■□□□□ 0.26
Sgms1Q8VCQ6 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sgms1Q8VCQ6 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sgms1Q8VCQ6 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sgms1Q8VCQ6 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sgms1Q8VCQ6 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sgms1Q8VCQ6 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Sgms1Q8VCQ6 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Sgms1Q8VCQ6 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sgms1Q8VCQ6 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sgms1Q8VCQ6 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sgms1Q8VCQ6 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sgms1Q8VCQ6 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sgms1Q8VCQ6 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sgms1Q8VCQ6 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sgms1Q8VCQ6 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.68■□□□□ 0.26
Sgms1Q8VCQ6 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms