Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf8Q8VC56 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf8Q8VC56 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf8Q8VC56 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
Rnf8Q8VC56 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf8Q8VC56 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf8Q8VC56 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.97□□□□□ -0.01
Rnf8Q8VC56 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.97□□□□□ -0.01
Rnf8Q8VC56 Mir3081-201ENSMUST00000175305 84 ntBASIC14.97□□□□□ -0.01
Rnf8Q8VC56 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Rnf8Q8VC56 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.97□□□□□ -0.01
Rnf8Q8VC56 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.97□□□□□ -0.01
Rnf8Q8VC56 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf8Q8VC56 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf8Q8VC56 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.97□□□□□ -0.01
Rnf8Q8VC56 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf8Q8VC56 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf8Q8VC56 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf8Q8VC56 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.97□□□□□ -0.01
Rnf8Q8VC56 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf8Q8VC56 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.97□□□□□ -0.01
Rnf8Q8VC56 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf8Q8VC56 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf8Q8VC56 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf8Q8VC56 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Rnf8Q8VC56 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf8Q8VC56 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf8Q8VC56 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf8Q8VC56 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf8Q8VC56 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.96□□□□□ -0.01
Rnf8Q8VC56 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf8Q8VC56 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf8Q8VC56 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Rnf8Q8VC56 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Rnf8Q8VC56 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf8Q8VC56 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf8Q8VC56 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf8Q8VC56 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf8Q8VC56 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf8Q8VC56 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.96□□□□□ -0.01
Rnf8Q8VC56 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf8Q8VC56 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.96□□□□□ -0.01
Rnf8Q8VC56 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf8Q8VC56 Rprl3-201ENSMUST00000157400 290 ntBASIC14.96□□□□□ -0.01
Rnf8Q8VC56 Ank2-226ENSMUST00000189368 339 ntBASIC14.96□□□□□ -0.01
Rnf8Q8VC56 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf8Q8VC56 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.96□□□□□ -0.01
Rnf8Q8VC56 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.96□□□□□ -0.01
Rnf8Q8VC56 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf8Q8VC56 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf8Q8VC56 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf8Q8VC56 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf8Q8VC56 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf8Q8VC56 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
Rnf8Q8VC56 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rnf8Q8VC56 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.96□□□□□ -0.02
Rnf8Q8VC56 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rnf8Q8VC56 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf8Q8VC56 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.95□□□□□ -0.02
Rnf8Q8VC56 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf8Q8VC56 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf8Q8VC56 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf8Q8VC56 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.95□□□□□ -0.02
Rnf8Q8VC56 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf8Q8VC56 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf8Q8VC56 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf8Q8VC56 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf8Q8VC56 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Rnf8Q8VC56 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf8Q8VC56 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf8Q8VC56 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf8Q8VC56 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf8Q8VC56 Gm9103-201ENSMUST00000119371 405 ntBASIC14.95□□□□□ -0.02
Rnf8Q8VC56 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf8Q8VC56 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.95□□□□□ -0.02
Rnf8Q8VC56 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.95□□□□□ -0.02
Rnf8Q8VC56 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf8Q8VC56 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf8Q8VC56 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
Rnf8Q8VC56 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.95□□□□□ -0.02
Rnf8Q8VC56 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf8Q8VC56 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Rnf8Q8VC56 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf8Q8VC56 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Rnf8Q8VC56 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Rnf8Q8VC56 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf8Q8VC56 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf8Q8VC56 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf8Q8VC56 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf8Q8VC56 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Rnf8Q8VC56 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.95□□□□□ -0.02
Rnf8Q8VC56 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf8Q8VC56 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf8Q8VC56 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf8Q8VC56 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf8Q8VC56 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf8Q8VC56 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Rnf8Q8VC56 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf8Q8VC56 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf8Q8VC56 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms