Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.99■□□□□ 0.31
Rpap2Q8VC34 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Rpap2Q8VC34 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Rpap2Q8VC34 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rpap2Q8VC34 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rpap2Q8VC34 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rpap2Q8VC34 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rpap2Q8VC34 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rpap2Q8VC34 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rpap2Q8VC34 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rpap2Q8VC34 Gm13884-201ENSMUST00000118103 829 ntBASIC16.98■□□□□ 0.31
Rpap2Q8VC34 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.98■□□□□ 0.31
Rpap2Q8VC34 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rpap2Q8VC34 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.98■□□□□ 0.31
Rpap2Q8VC34 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rpap2Q8VC34 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rpap2Q8VC34 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rpap2Q8VC34 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rpap2Q8VC34 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rpap2Q8VC34 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rpap2Q8VC34 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rpap2Q8VC34 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Rpap2Q8VC34 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rpap2Q8VC34 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rpap2Q8VC34 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rpap2Q8VC34 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rpap2Q8VC34 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rpap2Q8VC34 Gm7222-201ENSMUST00000117512 906 ntBASIC16.97■□□□□ 0.31
Rpap2Q8VC34 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rpap2Q8VC34 Gm8318-201ENSMUST00000182954 872 ntBASIC16.97■□□□□ 0.31
Rpap2Q8VC34 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.97■□□□□ 0.31
Rpap2Q8VC34 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.97■□□□□ 0.31
Rpap2Q8VC34 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rpap2Q8VC34 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rpap2Q8VC34 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC16.97■□□□□ 0.31
Rpap2Q8VC34 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.97■□□□□ 0.31
Rpap2Q8VC34 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rpap2Q8VC34 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rpap2Q8VC34 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rpap2Q8VC34 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rpap2Q8VC34 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rpap2Q8VC34 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.96■□□□□ 0.31
Rpap2Q8VC34 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rpap2Q8VC34 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.96■□□□□ 0.31
Rpap2Q8VC34 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.96■□□□□ 0.31
Rpap2Q8VC34 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rpap2Q8VC34 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Rpap2Q8VC34 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rpap2Q8VC34 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rpap2Q8VC34 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rpap2Q8VC34 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rpap2Q8VC34 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rpap2Q8VC34 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rpap2Q8VC34 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rpap2Q8VC34 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rpap2Q8VC34 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rpap2Q8VC34 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Rpap2Q8VC34 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rpap2Q8VC34 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rpap2Q8VC34 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.96■□□□□ 0.31
Rpap2Q8VC34 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rpap2Q8VC34 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.96■□□□□ 0.31
Rpap2Q8VC34 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Rpap2Q8VC34 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rpap2Q8VC34 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rpap2Q8VC34 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rpap2Q8VC34 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rpap2Q8VC34 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rpap2Q8VC34 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rpap2Q8VC34 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rpap2Q8VC34 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpap2Q8VC34 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rpap2Q8VC34 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpap2Q8VC34 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpap2Q8VC34 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpap2Q8VC34 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpap2Q8VC34 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.95■□□□□ 0.3
Rpap2Q8VC34 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpap2Q8VC34 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.95■□□□□ 0.3
Rpap2Q8VC34 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC16.95■□□□□ 0.3
Rpap2Q8VC34 Gm10060-201ENSMUST00000212002 111 ntBASIC16.95■□□□□ 0.3
Rpap2Q8VC34 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpap2Q8VC34 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Rpap2Q8VC34 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpap2Q8VC34 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Rpap2Q8VC34 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpap2Q8VC34 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.95■□□□□ 0.3
Rpap2Q8VC34 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.95■□□□□ 0.3
Rpap2Q8VC34 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Rpap2Q8VC34 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.95■□□□□ 0.3
Rpap2Q8VC34 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpap2Q8VC34 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpap2Q8VC34 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpap2Q8VC34 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rpap2Q8VC34 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rpap2Q8VC34 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpap2Q8VC34 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rpap2Q8VC34 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC16.94■□□□□ 0.3
Rpap2Q8VC34 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpap2Q8VC34 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms