Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp7Q8R1T1 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp7Q8R1T1 Gm2272-201ENSMUST00000194903 582 ntBASIC19.75■□□□□ 0.75
Chmp7Q8R1T1 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp7Q8R1T1 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC19.75■□□□□ 0.75
Chmp7Q8R1T1 Gm43125-201ENSMUST00000201724 730 ntBASIC19.75■□□□□ 0.75
Chmp7Q8R1T1 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Chmp7Q8R1T1 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp7Q8R1T1 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC19.75■□□□□ 0.75
Chmp7Q8R1T1 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp7Q8R1T1 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp7Q8R1T1 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp7Q8R1T1 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Chmp7Q8R1T1 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC19.74■□□□□ 0.75
Chmp7Q8R1T1 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp7Q8R1T1 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp7Q8R1T1 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp7Q8R1T1 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp7Q8R1T1 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp7Q8R1T1 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC19.74■□□□□ 0.75
Chmp7Q8R1T1 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp7Q8R1T1 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp7Q8R1T1 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Chmp7Q8R1T1 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC19.74■□□□□ 0.75
Chmp7Q8R1T1 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC19.74■□□□□ 0.75
Chmp7Q8R1T1 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp7Q8R1T1 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp7Q8R1T1 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC19.74■□□□□ 0.75
Chmp7Q8R1T1 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC19.74■□□□□ 0.75
Chmp7Q8R1T1 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp7Q8R1T1 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp7Q8R1T1 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp7Q8R1T1 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp7Q8R1T1 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp7Q8R1T1 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp7Q8R1T1 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp7Q8R1T1 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp7Q8R1T1 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp7Q8R1T1 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp7Q8R1T1 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp7Q8R1T1 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp7Q8R1T1 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp7Q8R1T1 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp7Q8R1T1 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp7Q8R1T1 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp7Q8R1T1 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp7Q8R1T1 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp7Q8R1T1 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp7Q8R1T1 AC130669.1-201ENSMUST00000228537 1672 ntBASIC19.73■□□□□ 0.75
Chmp7Q8R1T1 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC19.73■□□□□ 0.75
Chmp7Q8R1T1 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC19.73■□□□□ 0.75
Chmp7Q8R1T1 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC19.73■□□□□ 0.75
Chmp7Q8R1T1 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp7Q8R1T1 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp7Q8R1T1 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC19.73■□□□□ 0.75
Chmp7Q8R1T1 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Chmp7Q8R1T1 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Chmp7Q8R1T1 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp7Q8R1T1 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC19.73■□□□□ 0.75
Chmp7Q8R1T1 Gm10154-201ENSMUST00000084445 354 ntBASIC19.73■□□□□ 0.75
Chmp7Q8R1T1 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp7Q8R1T1 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
Chmp7Q8R1T1 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp7Q8R1T1 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp7Q8R1T1 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp7Q8R1T1 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp7Q8R1T1 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC19.72■□□□□ 0.75
Chmp7Q8R1T1 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Chmp7Q8R1T1 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp7Q8R1T1 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp7Q8R1T1 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Chmp7Q8R1T1 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Chmp7Q8R1T1 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp7Q8R1T1 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp7Q8R1T1 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp7Q8R1T1 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC19.72■□□□□ 0.75
Chmp7Q8R1T1 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC19.72■□□□□ 0.75
Chmp7Q8R1T1 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC19.72■□□□□ 0.75
Chmp7Q8R1T1 AC140397.2-201ENSMUST00000224213 834 ntBASIC19.72■□□□□ 0.75
Chmp7Q8R1T1 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp7Q8R1T1 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Chmp7Q8R1T1 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC19.72■□□□□ 0.75
Chmp7Q8R1T1 Fgf17-202ENSMUST00000227123 1336 ntBASIC19.72■□□□□ 0.75
Chmp7Q8R1T1 Gm43072-201ENSMUST00000200283 1671 ntBASIC19.71■□□□□ 0.75
Chmp7Q8R1T1 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp7Q8R1T1 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp7Q8R1T1 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC19.71■□□□□ 0.75
Chmp7Q8R1T1 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Chmp7Q8R1T1 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC19.71■□□□□ 0.75
Chmp7Q8R1T1 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Chmp7Q8R1T1 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Chmp7Q8R1T1 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp7Q8R1T1 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp7Q8R1T1 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC19.71■□□□□ 0.75
Chmp7Q8R1T1 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp7Q8R1T1 Gm25948-201ENSMUST00000175334 112 ntBASIC19.71■□□□□ 0.75
Chmp7Q8R1T1 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC19.71■□□□□ 0.75
Chmp7Q8R1T1 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC19.71■□□□□ 0.75
Chmp7Q8R1T1 CT025555.1-201ENSMUST00000225901 1217 ntBASIC19.71■□□□□ 0.75
Chmp7Q8R1T1 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms