Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sf3a1Q8K4Z5 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sf3a1Q8K4Z5 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sf3a1Q8K4Z5 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sf3a1Q8K4Z5 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sf3a1Q8K4Z5 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Sf3a1Q8K4Z5 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sf3a1Q8K4Z5 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sf3a1Q8K4Z5 Ccdc166-201ENSMUST00000182172 2584 ntBASIC18.93■□□□□ 0.62
Sf3a1Q8K4Z5 Grk6-207ENSMUST00000225925 2769 ntBASIC18.93■□□□□ 0.62
Sf3a1Q8K4Z5 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sf3a1Q8K4Z5 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sf3a1Q8K4Z5 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Sf3a1Q8K4Z5 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sf3a1Q8K4Z5 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sf3a1Q8K4Z5 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sf3a1Q8K4Z5 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sf3a1Q8K4Z5 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sf3a1Q8K4Z5 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Sf3a1Q8K4Z5 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC18.93■□□□□ 0.62
Sf3a1Q8K4Z5 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sf3a1Q8K4Z5 Gm6550-201ENSMUST00000187574 993 ntBASIC18.93■□□□□ 0.62
Sf3a1Q8K4Z5 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sf3a1Q8K4Z5 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC18.93■□□□□ 0.62
Sf3a1Q8K4Z5 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sf3a1Q8K4Z5 AC122024.2-201ENSMUST00000220086 871 ntBASIC18.93■□□□□ 0.62
Sf3a1Q8K4Z5 AC159093.1-201ENSMUST00000227779 380 ntBASIC18.93■□□□□ 0.62
Sf3a1Q8K4Z5 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sf3a1Q8K4Z5 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sf3a1Q8K4Z5 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sf3a1Q8K4Z5 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC18.93■□□□□ 0.62
Sf3a1Q8K4Z5 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sf3a1Q8K4Z5 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sf3a1Q8K4Z5 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sf3a1Q8K4Z5 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sf3a1Q8K4Z5 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sf3a1Q8K4Z5 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Sf3a1Q8K4Z5 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sf3a1Q8K4Z5 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sf3a1Q8K4Z5 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC18.92■□□□□ 0.62
Sf3a1Q8K4Z5 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sf3a1Q8K4Z5 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sf3a1Q8K4Z5 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Sf3a1Q8K4Z5 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sf3a1Q8K4Z5 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sf3a1Q8K4Z5 Gm7222-201ENSMUST00000117512 906 ntBASIC18.92■□□□□ 0.62
Sf3a1Q8K4Z5 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Sf3a1Q8K4Z5 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC18.92■□□□□ 0.62
Sf3a1Q8K4Z5 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC18.92■□□□□ 0.62
Sf3a1Q8K4Z5 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sf3a1Q8K4Z5 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sf3a1Q8K4Z5 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sf3a1Q8K4Z5 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC18.92■□□□□ 0.62
Sf3a1Q8K4Z5 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sf3a1Q8K4Z5 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Sf3a1Q8K4Z5 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Sf3a1Q8K4Z5 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC18.92■□□□□ 0.62
Sf3a1Q8K4Z5 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sf3a1Q8K4Z5 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sf3a1Q8K4Z5 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Sf3a1Q8K4Z5 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sf3a1Q8K4Z5 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sf3a1Q8K4Z5 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sf3a1Q8K4Z5 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sf3a1Q8K4Z5 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sf3a1Q8K4Z5 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sf3a1Q8K4Z5 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sf3a1Q8K4Z5 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sf3a1Q8K4Z5 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sf3a1Q8K4Z5 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sf3a1Q8K4Z5 AC163637.1-201ENSMUST00000215491 1894 ntBASIC18.91■□□□□ 0.62
Sf3a1Q8K4Z5 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Sf3a1Q8K4Z5 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sf3a1Q8K4Z5 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Sf3a1Q8K4Z5 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sf3a1Q8K4Z5 Gm14722-201ENSMUST00000118943 689 ntBASIC18.91■□□□□ 0.62
Sf3a1Q8K4Z5 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC18.91■□□□□ 0.62
Sf3a1Q8K4Z5 Gm5682-201ENSMUST00000173402 505 ntBASIC18.91■□□□□ 0.62
Sf3a1Q8K4Z5 Mir5131-201ENSMUST00000175426 93 ntBASIC18.91■□□□□ 0.62
Sf3a1Q8K4Z5 Gm7286-201ENSMUST00000182691 1007 ntBASIC18.91■□□□□ 0.62
Sf3a1Q8K4Z5 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC18.91■□□□□ 0.62
Sf3a1Q8K4Z5 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Sf3a1Q8K4Z5 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sf3a1Q8K4Z5 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sf3a1Q8K4Z5 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
Sf3a1Q8K4Z5 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sf3a1Q8K4Z5 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
Sf3a1Q8K4Z5 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Sf3a1Q8K4Z5 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Sf3a1Q8K4Z5 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sf3a1Q8K4Z5 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Sf3a1Q8K4Z5 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sf3a1Q8K4Z5 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sf3a1Q8K4Z5 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sf3a1Q8K4Z5 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC18.9■□□□□ 0.62
Sf3a1Q8K4Z5 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sf3a1Q8K4Z5 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sf3a1Q8K4Z5 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sf3a1Q8K4Z5 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
Sf3a1Q8K4Z5 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms