Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Alms1Q8K4E0 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Alms1Q8K4E0 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Alms1Q8K4E0 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Alms1Q8K4E0 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Alms1Q8K4E0 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Alms1Q8K4E0 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.09■□□□□ 0.01
Alms1Q8K4E0 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Alms1Q8K4E0 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Alms1Q8K4E0 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Alms1Q8K4E0 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Alms1Q8K4E0 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Alms1Q8K4E0 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Alms1Q8K4E0 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Alms1Q8K4E0 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Alms1Q8K4E0 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Alms1Q8K4E0 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Alms1Q8K4E0 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Alms1Q8K4E0 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Alms1Q8K4E0 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Alms1Q8K4E0 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Alms1Q8K4E0 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Alms1Q8K4E0 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC15.09■□□□□ 0.01
Alms1Q8K4E0 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Alms1Q8K4E0 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Alms1Q8K4E0 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Alms1Q8K4E0 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Alms1Q8K4E0 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Alms1Q8K4E0 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Alms1Q8K4E0 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Alms1Q8K4E0 Nudt18-203ENSMUST00000228768 1578 ntBASIC15.09■□□□□ 0.01
Alms1Q8K4E0 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Alms1Q8K4E0 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Alms1Q8K4E0 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Alms1Q8K4E0 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Alms1Q8K4E0 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Alms1Q8K4E0 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Alms1Q8K4E0 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC15.08■□□□□ 0.01
Alms1Q8K4E0 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.08■□□□□ 0
Alms1Q8K4E0 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
Alms1Q8K4E0 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Alms1Q8K4E0 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.08■□□□□ 0
Alms1Q8K4E0 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.08■□□□□ 0
Alms1Q8K4E0 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Alms1Q8K4E0 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.08■□□□□ 0
Alms1Q8K4E0 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Alms1Q8K4E0 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Alms1Q8K4E0 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC15.08■□□□□ 0
Alms1Q8K4E0 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Alms1Q8K4E0 Gpr146-202ENSMUST00000053120 1040 ntBASIC15.08■□□□□ 0
Alms1Q8K4E0 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
Alms1Q8K4E0 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Alms1Q8K4E0 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.07■□□□□ 0
Alms1Q8K4E0 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC15.07■□□□□ 0
Alms1Q8K4E0 Gm17271-201ENSMUST00000165535 355 ntBASIC15.07■□□□□ 0
Alms1Q8K4E0 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Alms1Q8K4E0 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC15.07■□□□□ 0
Alms1Q8K4E0 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.07■□□□□ 0
Alms1Q8K4E0 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Alms1Q8K4E0 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Alms1Q8K4E0 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC15.07■□□□□ 0
Alms1Q8K4E0 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Alms1Q8K4E0 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Alms1Q8K4E0 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.07■□□□□ 0
Alms1Q8K4E0 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC15.07■□□□□ 0
Alms1Q8K4E0 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC15.07■□□□□ 0
Alms1Q8K4E0 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC15.07■□□□□ 0
Alms1Q8K4E0 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Alms1Q8K4E0 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.07■□□□□ 0
Alms1Q8K4E0 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.07■□□□□ 0
Alms1Q8K4E0 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Alms1Q8K4E0 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Alms1Q8K4E0 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Alms1Q8K4E0 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Alms1Q8K4E0 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC15.07■□□□□ 0
Alms1Q8K4E0 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC15.07■□□□□ 0
Alms1Q8K4E0 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.07■□□□□ 0
Alms1Q8K4E0 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC15.07■□□□□ 0
Alms1Q8K4E0 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC15.07■□□□□ 0
Alms1Q8K4E0 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC15.07■□□□□ 0
Alms1Q8K4E0 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Alms1Q8K4E0 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Alms1Q8K4E0 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.07■□□□□ 0
Alms1Q8K4E0 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Alms1Q8K4E0 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Alms1Q8K4E0 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Alms1Q8K4E0 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Alms1Q8K4E0 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC15.06■□□□□ 0
Alms1Q8K4E0 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.06■□□□□ 0
Alms1Q8K4E0 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.06■□□□□ 0
Alms1Q8K4E0 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Alms1Q8K4E0 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.06■□□□□ 0
Alms1Q8K4E0 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Alms1Q8K4E0 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Alms1Q8K4E0 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Alms1Q8K4E0 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC15.06■□□□□ 0
Alms1Q8K4E0 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Alms1Q8K4E0 Gm7653-201ENSMUST00000214567 508 ntBASIC15.06■□□□□ 0
Alms1Q8K4E0 CT030684.1-201ENSMUST00000227292 914 ntBASIC15.06■□□□□ 0
Alms1Q8K4E0 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms