Protein–RNA interactions for Protein: Q8CJ40

Crocc, Rootletin, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CroccQ8CJ40 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.82□□□□□ -0.04
CroccQ8CJ40 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CroccQ8CJ40 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CroccQ8CJ40 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CroccQ8CJ40 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CroccQ8CJ40 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CroccQ8CJ40 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CroccQ8CJ40 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CroccQ8CJ40 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.82□□□□□ -0.04
CroccQ8CJ40 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CroccQ8CJ40 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.82□□□□□ -0.04
CroccQ8CJ40 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CroccQ8CJ40 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.82□□□□□ -0.04
CroccQ8CJ40 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CroccQ8CJ40 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CroccQ8CJ40 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.82□□□□□ -0.04
CroccQ8CJ40 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CroccQ8CJ40 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CroccQ8CJ40 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CroccQ8CJ40 BC037039-201ENSMUST00000192003 2205 ntBASIC14.81□□□□□ -0.04
CroccQ8CJ40 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CroccQ8CJ40 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CroccQ8CJ40 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CroccQ8CJ40 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CroccQ8CJ40 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CroccQ8CJ40 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CroccQ8CJ40 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CroccQ8CJ40 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CroccQ8CJ40 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CroccQ8CJ40 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CroccQ8CJ40 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CroccQ8CJ40 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CroccQ8CJ40 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CroccQ8CJ40 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CroccQ8CJ40 Gm4535-201ENSMUST00000182274 558 ntBASIC14.81□□□□□ -0.04
CroccQ8CJ40 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.81□□□□□ -0.04
CroccQ8CJ40 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.81□□□□□ -0.04
CroccQ8CJ40 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CroccQ8CJ40 Gm10355-201ENSMUST00000097146 517 ntBASIC14.81□□□□□ -0.04
CroccQ8CJ40 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CroccQ8CJ40 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CroccQ8CJ40 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CroccQ8CJ40 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.81□□□□□ -0.04
CroccQ8CJ40 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CroccQ8CJ40 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CroccQ8CJ40 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
CroccQ8CJ40 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CroccQ8CJ40 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.8□□□□□ -0.04
CroccQ8CJ40 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.8□□□□□ -0.04
CroccQ8CJ40 Gm24589-201ENSMUST00000116692 94 ntBASIC14.8□□□□□ -0.04
CroccQ8CJ40 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.8□□□□□ -0.04
CroccQ8CJ40 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
CroccQ8CJ40 Gm7230-201ENSMUST00000173026 815 ntBASIC14.8□□□□□ -0.04
CroccQ8CJ40 Gm6550-201ENSMUST00000187574 993 ntBASIC14.8□□□□□ -0.04
CroccQ8CJ40 Gm6376-201ENSMUST00000209407 580 ntBASIC14.8□□□□□ -0.04
CroccQ8CJ40 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.8□□□□□ -0.04
CroccQ8CJ40 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CroccQ8CJ40 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CroccQ8CJ40 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CroccQ8CJ40 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CroccQ8CJ40 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CroccQ8CJ40 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CroccQ8CJ40 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CroccQ8CJ40 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CroccQ8CJ40 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CroccQ8CJ40 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.8□□□□□ -0.04
CroccQ8CJ40 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
CroccQ8CJ40 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CroccQ8CJ40 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.8□□□□□ -0.04
CroccQ8CJ40 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CroccQ8CJ40 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.8□□□□□ -0.04
CroccQ8CJ40 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CroccQ8CJ40 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CroccQ8CJ40 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CroccQ8CJ40 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CroccQ8CJ40 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.8□□□□□ -0.04
CroccQ8CJ40 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CroccQ8CJ40 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CroccQ8CJ40 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CroccQ8CJ40 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CroccQ8CJ40 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.79□□□□□ -0.04
CroccQ8CJ40 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CroccQ8CJ40 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CroccQ8CJ40 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CroccQ8CJ40 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CroccQ8CJ40 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CroccQ8CJ40 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.79□□□□□ -0.04
CroccQ8CJ40 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CroccQ8CJ40 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CroccQ8CJ40 Gm6089-201ENSMUST00000197666 938 ntBASIC14.79□□□□□ -0.04
CroccQ8CJ40 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.79□□□□□ -0.04
CroccQ8CJ40 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.79□□□□□ -0.04
CroccQ8CJ40 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.79□□□□□ -0.04
CroccQ8CJ40 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.79□□□□□ -0.04
CroccQ8CJ40 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CroccQ8CJ40 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CroccQ8CJ40 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CroccQ8CJ40 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CroccQ8CJ40 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CroccQ8CJ40 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms