Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Syne4Q8CII8 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Syne4Q8CII8 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Syne4Q8CII8 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Syne4Q8CII8 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Syne4Q8CII8 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Syne4Q8CII8 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Syne4Q8CII8 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
Syne4Q8CII8 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC17.47■□□□□ 0.39
Syne4Q8CII8 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Syne4Q8CII8 Gm27989-201ENSMUST00000184721 107 ntBASIC17.47■□□□□ 0.39
Syne4Q8CII8 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC17.47■□□□□ 0.39
Syne4Q8CII8 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Syne4Q8CII8 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC17.47■□□□□ 0.39
Syne4Q8CII8 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Syne4Q8CII8 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Syne4Q8CII8 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Syne4Q8CII8 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Syne4Q8CII8 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Syne4Q8CII8 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Syne4Q8CII8 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Syne4Q8CII8 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Syne4Q8CII8 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Syne4Q8CII8 Gm7669-201ENSMUST00000210184 1603 ntBASIC17.47■□□□□ 0.39
Syne4Q8CII8 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.46■□□□□ 0.39
Syne4Q8CII8 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Syne4Q8CII8 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Syne4Q8CII8 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Syne4Q8CII8 Gm13517-201ENSMUST00000120782 1495 ntBASIC17.46■□□□□ 0.39
Syne4Q8CII8 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Syne4Q8CII8 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Syne4Q8CII8 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Syne4Q8CII8 Gm11543-201ENSMUST00000120758 370 ntBASIC17.46■□□□□ 0.39
Syne4Q8CII8 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Syne4Q8CII8 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC17.46■□□□□ 0.39
Syne4Q8CII8 Gm38294-201ENSMUST00000192831 381 ntBASIC17.46■□□□□ 0.39
Syne4Q8CII8 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC17.46■□□□□ 0.39
Syne4Q8CII8 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Syne4Q8CII8 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
Syne4Q8CII8 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Syne4Q8CII8 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Syne4Q8CII8 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.38
Syne4Q8CII8 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
Syne4Q8CII8 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Syne4Q8CII8 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Syne4Q8CII8 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Syne4Q8CII8 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Syne4Q8CII8 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Syne4Q8CII8 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.45■□□□□ 0.38
Syne4Q8CII8 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Syne4Q8CII8 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Syne4Q8CII8 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC17.45■□□□□ 0.38
Syne4Q8CII8 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Syne4Q8CII8 Mir8102-201ENSMUST00000184148 139 ntBASIC17.45■□□□□ 0.38
Syne4Q8CII8 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Syne4Q8CII8 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Syne4Q8CII8 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Syne4Q8CII8 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Syne4Q8CII8 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Syne4Q8CII8 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Syne4Q8CII8 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Syne4Q8CII8 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Syne4Q8CII8 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Syne4Q8CII8 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Syne4Q8CII8 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Syne4Q8CII8 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.44■□□□□ 0.38
Syne4Q8CII8 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Syne4Q8CII8 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC17.44■□□□□ 0.38
Syne4Q8CII8 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Syne4Q8CII8 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.44■□□□□ 0.38
Syne4Q8CII8 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Syne4Q8CII8 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Syne4Q8CII8 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Syne4Q8CII8 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC17.44■□□□□ 0.38
Syne4Q8CII8 Gm2810-201ENSMUST00000118681 990 ntBASIC17.44■□□□□ 0.38
Syne4Q8CII8 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC17.44■□□□□ 0.38
Syne4Q8CII8 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC17.44■□□□□ 0.38
Syne4Q8CII8 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Syne4Q8CII8 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Syne4Q8CII8 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Syne4Q8CII8 Wdyhv1-203ENSMUST00000226889 394 ntBASIC17.44■□□□□ 0.38
Syne4Q8CII8 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Syne4Q8CII8 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Syne4Q8CII8 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Syne4Q8CII8 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.44■□□□□ 0.38
Syne4Q8CII8 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Syne4Q8CII8 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Syne4Q8CII8 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.44■□□□□ 0.38
Syne4Q8CII8 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Syne4Q8CII8 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Syne4Q8CII8 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Syne4Q8CII8 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Syne4Q8CII8 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Syne4Q8CII8 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Syne4Q8CII8 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Syne4Q8CII8 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Syne4Q8CII8 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Syne4Q8CII8 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Syne4Q8CII8 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC17.43■□□□□ 0.38
Syne4Q8CII8 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms