Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Zc3h3Q8CHP0 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC15.08■□□□□ 0
Zc3h3Q8CHP0 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Zc3h3Q8CHP0 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC15.08■□□□□ 0
Zc3h3Q8CHP0 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Zc3h3Q8CHP0 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC15.08■□□□□ 0
Zc3h3Q8CHP0 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Zc3h3Q8CHP0 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Zc3h3Q8CHP0 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Zc3h3Q8CHP0 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Zc3h3Q8CHP0 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.08■□□□□ 0
Zc3h3Q8CHP0 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Zc3h3Q8CHP0 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Zc3h3Q8CHP0 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15.08■□□□□ 0
Zc3h3Q8CHP0 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Zc3h3Q8CHP0 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Zc3h3Q8CHP0 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Zc3h3Q8CHP0 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zc3h3Q8CHP0 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zc3h3Q8CHP0 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zc3h3Q8CHP0 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zc3h3Q8CHP0 Gm4204-201ENSMUST00000110798 1231 ntBASIC15.07■□□□□ 0
Zc3h3Q8CHP0 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.07■□□□□ 0
Zc3h3Q8CHP0 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.07■□□□□ 0
Zc3h3Q8CHP0 Gm15483-201ENSMUST00000120338 456 ntBASIC15.07■□□□□ 0
Zc3h3Q8CHP0 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.07■□□□□ 0
Zc3h3Q8CHP0 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.07■□□□□ 0
Zc3h3Q8CHP0 Gm16026-204ENSMUST00000162652 683 ntBASIC15.07■□□□□ 0
Zc3h3Q8CHP0 Gm29667-201ENSMUST00000190817 490 ntBASIC15.07■□□□□ 0
Zc3h3Q8CHP0 Gm6266-201ENSMUST00000203844 806 ntBASIC15.07■□□□□ 0
Zc3h3Q8CHP0 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC15.07■□□□□ 0
Zc3h3Q8CHP0 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zc3h3Q8CHP0 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC15.07■□□□□ 0
Zc3h3Q8CHP0 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
Zc3h3Q8CHP0 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC15.07■□□□□ 0
Zc3h3Q8CHP0 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.07■□□□□ 0
Zc3h3Q8CHP0 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zc3h3Q8CHP0 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Zc3h3Q8CHP0 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zc3h3Q8CHP0 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Zc3h3Q8CHP0 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Zc3h3Q8CHP0 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.06■□□□□ 0
Zc3h3Q8CHP0 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Zc3h3Q8CHP0 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Zc3h3Q8CHP0 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Zc3h3Q8CHP0 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.06■□□□□ 0
Zc3h3Q8CHP0 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Zc3h3Q8CHP0 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.06■□□□□ 0
Zc3h3Q8CHP0 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Zc3h3Q8CHP0 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Zc3h3Q8CHP0 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Zc3h3Q8CHP0 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC15.06■□□□□ 0
Zc3h3Q8CHP0 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC15.06■□□□□ 0
Zc3h3Q8CHP0 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Zc3h3Q8CHP0 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Zc3h3Q8CHP0 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Zc3h3Q8CHP0 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Zc3h3Q8CHP0 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.06■□□□□ 0
Zc3h3Q8CHP0 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Zc3h3Q8CHP0 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Zc3h3Q8CHP0 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Zc3h3Q8CHP0 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Zc3h3Q8CHP0 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Zc3h3Q8CHP0 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Zc3h3Q8CHP0 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.06■□□□□ 0
Zc3h3Q8CHP0 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Zc3h3Q8CHP0 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Zc3h3Q8CHP0 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Zc3h3Q8CHP0 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Zc3h3Q8CHP0 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Zc3h3Q8CHP0 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Zc3h3Q8CHP0 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Zc3h3Q8CHP0 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC15.05■□□□□ -0
Zc3h3Q8CHP0 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.05■□□□□ -0
Zc3h3Q8CHP0 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Zc3h3Q8CHP0 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC15.05■□□□□ -0
Zc3h3Q8CHP0 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC15.05■□□□□ -0
Zc3h3Q8CHP0 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC15.05■□□□□ -0
Zc3h3Q8CHP0 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Zc3h3Q8CHP0 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Zc3h3Q8CHP0 Gm9115-201ENSMUST00000120192 1348 ntBASIC15.05■□□□□ -0
Zc3h3Q8CHP0 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Zc3h3Q8CHP0 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC15.05■□□□□ -0
Zc3h3Q8CHP0 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.05■□□□□ -0
Zc3h3Q8CHP0 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Zc3h3Q8CHP0 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Zc3h3Q8CHP0 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
Zc3h3Q8CHP0 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Zc3h3Q8CHP0 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Zc3h3Q8CHP0 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Zc3h3Q8CHP0 Gm37811-201ENSMUST00000192416 2601 ntBASIC15.05■□□□□ -0
Zc3h3Q8CHP0 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Zc3h3Q8CHP0 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.04■□□□□ -0
Zc3h3Q8CHP0 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Zc3h3Q8CHP0 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.04■□□□□ -0
Zc3h3Q8CHP0 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC15.04■□□□□ -0
Zc3h3Q8CHP0 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.04■□□□□ -0
Zc3h3Q8CHP0 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Zc3h3Q8CHP0 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC15.04■□□□□ -0
Zc3h3Q8CHP0 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms