Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Gm18246-201ENSMUST00000221023 728 ntBASIC15.03■□□□□ -0
Rdh1Q8CGV4 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rdh1Q8CGV4 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rdh1Q8CGV4 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rdh1Q8CGV4 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Rdh1Q8CGV4 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Rdh1Q8CGV4 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.03■□□□□ -0
Rdh1Q8CGV4 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rdh1Q8CGV4 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rdh1Q8CGV4 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rdh1Q8CGV4 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.02■□□□□ -0
Rdh1Q8CGV4 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rdh1Q8CGV4 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rdh1Q8CGV4 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Rdh1Q8CGV4 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Rdh1Q8CGV4 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rdh1Q8CGV4 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rdh1Q8CGV4 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Rdh1Q8CGV4 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Rdh1Q8CGV4 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rdh1Q8CGV4 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Rdh1Q8CGV4 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rdh1Q8CGV4 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rdh1Q8CGV4 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rdh1Q8CGV4 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC15.02■□□□□ -0
Rdh1Q8CGV4 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.02■□□□□ -0
Rdh1Q8CGV4 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC15.02■□□□□ -0
Rdh1Q8CGV4 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
Rdh1Q8CGV4 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rdh1Q8CGV4 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rdh1Q8CGV4 Gm6736-201ENSMUST00000166583 948 ntBASIC15.02■□□□□ -0
Rdh1Q8CGV4 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rdh1Q8CGV4 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC15.02■□□□□ -0
Rdh1Q8CGV4 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rdh1Q8CGV4 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rdh1Q8CGV4 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rdh1Q8CGV4 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rdh1Q8CGV4 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rdh1Q8CGV4 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.02□□□□□ -0.01
Rdh1Q8CGV4 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Rdh1Q8CGV4 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC15.02□□□□□ -0.01
Rdh1Q8CGV4 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rdh1Q8CGV4 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
Rdh1Q8CGV4 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Rdh1Q8CGV4 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rdh1Q8CGV4 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rdh1Q8CGV4 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Rdh1Q8CGV4 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rdh1Q8CGV4 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rdh1Q8CGV4 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rdh1Q8CGV4 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rdh1Q8CGV4 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rdh1Q8CGV4 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rdh1Q8CGV4 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.01□□□□□ -0.01
Rdh1Q8CGV4 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Rdh1Q8CGV4 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rdh1Q8CGV4 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rdh1Q8CGV4 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC15.01□□□□□ -0.01
Rdh1Q8CGV4 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC15.01□□□□□ -0.01
Rdh1Q8CGV4 Gm10499-201ENSMUST00000174094 934 ntBASIC15.01□□□□□ -0.01
Rdh1Q8CGV4 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Rdh1Q8CGV4 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rdh1Q8CGV4 Mir7036b-201ENSMUST00000184791 63 ntBASIC15.01□□□□□ -0.01
Rdh1Q8CGV4 Gm2756-201ENSMUST00000195851 400 ntBASIC15.01□□□□□ -0.01
Rdh1Q8CGV4 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.01□□□□□ -0.01
Rdh1Q8CGV4 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Rdh1Q8CGV4 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rdh1Q8CGV4 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rdh1Q8CGV4 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.01□□□□□ -0.01
Rdh1Q8CGV4 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Rdh1Q8CGV4 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Rdh1Q8CGV4 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rdh1Q8CGV4 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.01□□□□□ -0.01
Rdh1Q8CGV4 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rdh1Q8CGV4 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rdh1Q8CGV4 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Rdh1Q8CGV4 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rdh1Q8CGV4 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rdh1Q8CGV4 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Rdh1Q8CGV4 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15□□□□□ -0.01
Rdh1Q8CGV4 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15□□□□□ -0.01
Rdh1Q8CGV4 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rdh1Q8CGV4 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Rdh1Q8CGV4 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rdh1Q8CGV4 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rdh1Q8CGV4 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rdh1Q8CGV4 Gm4913-201ENSMUST00000117075 1290 ntBASIC15□□□□□ -0.01
Rdh1Q8CGV4 H2af-ps-201ENSMUST00000119066 295 ntBASIC15□□□□□ -0.01
Rdh1Q8CGV4 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Rdh1Q8CGV4 Gm17271-201ENSMUST00000165535 355 ntBASIC15□□□□□ -0.01
Rdh1Q8CGV4 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rdh1Q8CGV4 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC15□□□□□ -0.01
Rdh1Q8CGV4 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC15□□□□□ -0.01
Rdh1Q8CGV4 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Rdh1Q8CGV4 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC15□□□□□ -0.01
Rdh1Q8CGV4 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rdh1Q8CGV4 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rdh1Q8CGV4 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15□□□□□ -0.01
Rdh1Q8CGV4 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15□□□□□ -0.01
Rdh1Q8CGV4 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms