Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nup88Q8CEC0 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nup88Q8CEC0 Gm6858-201ENSMUST00000208582 1468 ntBASIC18.28■□□□□ 0.52
Nup88Q8CEC0 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nup88Q8CEC0 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Nup88Q8CEC0 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nup88Q8CEC0 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC18.28■□□□□ 0.52
Nup88Q8CEC0 Gm5712-201ENSMUST00000199748 1043 ntBASIC18.28■□□□□ 0.52
Nup88Q8CEC0 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Nup88Q8CEC0 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nup88Q8CEC0 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nup88Q8CEC0 CT009713.7-201ENSMUST00000224689 571 ntBASIC18.28■□□□□ 0.52
Nup88Q8CEC0 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nup88Q8CEC0 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC18.28■□□□□ 0.52
Nup88Q8CEC0 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nup88Q8CEC0 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nup88Q8CEC0 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Nup88Q8CEC0 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nup88Q8CEC0 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Nup88Q8CEC0 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC18.28■□□□□ 0.52
Nup88Q8CEC0 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC18.27■□□□□ 0.52
Nup88Q8CEC0 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nup88Q8CEC0 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Nup88Q8CEC0 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nup88Q8CEC0 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Nup88Q8CEC0 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Nup88Q8CEC0 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
Nup88Q8CEC0 Gm18206-201ENSMUST00000207027 926 ntBASIC18.27■□□□□ 0.52
Nup88Q8CEC0 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nup88Q8CEC0 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nup88Q8CEC0 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nup88Q8CEC0 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nup88Q8CEC0 AC132265.1-201ENSMUST00000219233 1665 ntBASIC18.27■□□□□ 0.52
Nup88Q8CEC0 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Nup88Q8CEC0 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Nup88Q8CEC0 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Nup88Q8CEC0 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
Nup88Q8CEC0 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Nup88Q8CEC0 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nup88Q8CEC0 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC18.26■□□□□ 0.51
Nup88Q8CEC0 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Nup88Q8CEC0 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nup88Q8CEC0 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nup88Q8CEC0 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nup88Q8CEC0 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nup88Q8CEC0 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nup88Q8CEC0 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Nup88Q8CEC0 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nup88Q8CEC0 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nup88Q8CEC0 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC18.26■□□□□ 0.51
Nup88Q8CEC0 Rbfox2-207ENSMUST00000227533 1041 ntBASIC18.26■□□□□ 0.51
Nup88Q8CEC0 AC114585.2-202ENSMUST00000228094 426 ntBASIC18.26■□□□□ 0.51
Nup88Q8CEC0 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nup88Q8CEC0 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Nup88Q8CEC0 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
Nup88Q8CEC0 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nup88Q8CEC0 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nup88Q8CEC0 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nup88Q8CEC0 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nup88Q8CEC0 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC18.26■□□□□ 0.51
Nup88Q8CEC0 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nup88Q8CEC0 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Nup88Q8CEC0 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nup88Q8CEC0 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Nup88Q8CEC0 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Nup88Q8CEC0 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.25■□□□□ 0.51
Nup88Q8CEC0 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
Nup88Q8CEC0 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nup88Q8CEC0 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nup88Q8CEC0 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nup88Q8CEC0 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nup88Q8CEC0 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
Nup88Q8CEC0 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC18.25■□□□□ 0.51
Nup88Q8CEC0 Gm10060-201ENSMUST00000212002 111 ntBASIC18.25■□□□□ 0.51
Nup88Q8CEC0 AC127349.1-201ENSMUST00000224590 266 ntBASIC18.25■□□□□ 0.51
Nup88Q8CEC0 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nup88Q8CEC0 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nup88Q8CEC0 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nup88Q8CEC0 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nup88Q8CEC0 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nup88Q8CEC0 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nup88Q8CEC0 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Nup88Q8CEC0 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nup88Q8CEC0 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nup88Q8CEC0 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nup88Q8CEC0 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nup88Q8CEC0 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nup88Q8CEC0 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nup88Q8CEC0 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Nup88Q8CEC0 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nup88Q8CEC0 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC18.24■□□□□ 0.51
Nup88Q8CEC0 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nup88Q8CEC0 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nup88Q8CEC0 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nup88Q8CEC0 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nup88Q8CEC0 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nup88Q8CEC0 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nup88Q8CEC0 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nup88Q8CEC0 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Nup88Q8CEC0 Gm1401-201ENSMUST00000122048 772 ntBASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 165.2 ms