Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Ccdc38Q8CDN8 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc38Q8CDN8 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc38Q8CDN8 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc38Q8CDN8 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc38Q8CDN8 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc38Q8CDN8 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Ccdc38Q8CDN8 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc38Q8CDN8 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc38Q8CDN8 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
Ccdc38Q8CDN8 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc38Q8CDN8 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc38Q8CDN8 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc38Q8CDN8 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc38Q8CDN8 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc38Q8CDN8 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.23■□□□□ 0.35
Ccdc38Q8CDN8 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc38Q8CDN8 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc38Q8CDN8 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.23■□□□□ 0.35
Ccdc38Q8CDN8 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Ccdc38Q8CDN8 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc38Q8CDN8 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc38Q8CDN8 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Ccdc38Q8CDN8 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Ccdc38Q8CDN8 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc38Q8CDN8 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc38Q8CDN8 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc38Q8CDN8 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc38Q8CDN8 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc38Q8CDN8 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc38Q8CDN8 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc38Q8CDN8 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Ccdc38Q8CDN8 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc38Q8CDN8 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc38Q8CDN8 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Ccdc38Q8CDN8 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc38Q8CDN8 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc38Q8CDN8 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Ccdc38Q8CDN8 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc38Q8CDN8 Gm27867-201ENSMUST00000184778 125 ntBASIC17.22■□□□□ 0.35
Ccdc38Q8CDN8 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.22■□□□□ 0.35
Ccdc38Q8CDN8 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.22■□□□□ 0.35
Ccdc38Q8CDN8 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.22■□□□□ 0.35
Ccdc38Q8CDN8 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc38Q8CDN8 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc38Q8CDN8 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc38Q8CDN8 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc38Q8CDN8 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc38Q8CDN8 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC17.22■□□□□ 0.35
Ccdc38Q8CDN8 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc38Q8CDN8 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc38Q8CDN8 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc38Q8CDN8 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc38Q8CDN8 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc38Q8CDN8 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc38Q8CDN8 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Ccdc38Q8CDN8 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc38Q8CDN8 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc38Q8CDN8 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc38Q8CDN8 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc38Q8CDN8 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc38Q8CDN8 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc38Q8CDN8 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.21■□□□□ 0.35
Ccdc38Q8CDN8 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc38Q8CDN8 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.21■□□□□ 0.35
Ccdc38Q8CDN8 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC17.21■□□□□ 0.35
Ccdc38Q8CDN8 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc38Q8CDN8 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc38Q8CDN8 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc38Q8CDN8 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC17.21■□□□□ 0.35
Ccdc38Q8CDN8 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Ccdc38Q8CDN8 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc38Q8CDN8 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ccdc38Q8CDN8 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ccdc38Q8CDN8 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.34
Ccdc38Q8CDN8 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Ccdc38Q8CDN8 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc38Q8CDN8 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc38Q8CDN8 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc38Q8CDN8 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc38Q8CDN8 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc38Q8CDN8 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc38Q8CDN8 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc38Q8CDN8 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc38Q8CDN8 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.2■□□□□ 0.34
Ccdc38Q8CDN8 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc38Q8CDN8 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc38Q8CDN8 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Ccdc38Q8CDN8 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc38Q8CDN8 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
Ccdc38Q8CDN8 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC17.2■□□□□ 0.34
Ccdc38Q8CDN8 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.2■□□□□ 0.34
Ccdc38Q8CDN8 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC17.2■□□□□ 0.34
Ccdc38Q8CDN8 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc38Q8CDN8 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc38Q8CDN8 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Ccdc38Q8CDN8 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc38Q8CDN8 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc38Q8CDN8 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc38Q8CDN8 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms