Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rtp1Q8C8C1 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rtp1Q8C8C1 Gm13453-201ENSMUST00000118708 357 ntBASIC17.61■□□□□ 0.41
Rtp1Q8C8C1 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rtp1Q8C8C1 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rtp1Q8C8C1 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC17.61■□□□□ 0.41
Rtp1Q8C8C1 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rtp1Q8C8C1 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC17.61■□□□□ 0.41
Rtp1Q8C8C1 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC17.61■□□□□ 0.41
Rtp1Q8C8C1 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Rtp1Q8C8C1 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rtp1Q8C8C1 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC17.61■□□□□ 0.41
Rtp1Q8C8C1 Rbfox2-208ENSMUST00000227930 1218 ntBASIC17.61■□□□□ 0.41
Rtp1Q8C8C1 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rtp1Q8C8C1 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
Rtp1Q8C8C1 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rtp1Q8C8C1 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rtp1Q8C8C1 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Rtp1Q8C8C1 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rtp1Q8C8C1 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rtp1Q8C8C1 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rtp1Q8C8C1 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rtp1Q8C8C1 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Rtp1Q8C8C1 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rtp1Q8C8C1 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rtp1Q8C8C1 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rtp1Q8C8C1 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtp1Q8C8C1 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rtp1Q8C8C1 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtp1Q8C8C1 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtp1Q8C8C1 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtp1Q8C8C1 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rtp1Q8C8C1 Gm7488-201ENSMUST00000117148 684 ntBASIC17.6■□□□□ 0.41
Rtp1Q8C8C1 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC17.6■□□□□ 0.41
Rtp1Q8C8C1 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC17.6■□□□□ 0.41
Rtp1Q8C8C1 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rtp1Q8C8C1 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC17.6■□□□□ 0.41
Rtp1Q8C8C1 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC17.6■□□□□ 0.41
Rtp1Q8C8C1 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Rtp1Q8C8C1 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC17.6■□□□□ 0.41
Rtp1Q8C8C1 AC135669.1-201ENSMUST00000213585 412 ntBASIC17.6■□□□□ 0.41
Rtp1Q8C8C1 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rtp1Q8C8C1 AC166341.4-201ENSMUST00000220625 123 ntBASIC17.6■□□□□ 0.41
Rtp1Q8C8C1 AC132467.2-202ENSMUST00000227726 559 ntBASIC17.6■□□□□ 0.41
Rtp1Q8C8C1 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtp1Q8C8C1 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtp1Q8C8C1 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtp1Q8C8C1 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC17.6■□□□□ 0.41
Rtp1Q8C8C1 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtp1Q8C8C1 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtp1Q8C8C1 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.6■□□□□ 0.41
Rtp1Q8C8C1 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtp1Q8C8C1 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtp1Q8C8C1 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rtp1Q8C8C1 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtp1Q8C8C1 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rtp1Q8C8C1 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtp1Q8C8C1 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtp1Q8C8C1 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtp1Q8C8C1 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtp1Q8C8C1 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rtp1Q8C8C1 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtp1Q8C8C1 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtp1Q8C8C1 Gm15222-202ENSMUST00000228667 1726 ntBASIC17.59■□□□□ 0.41
Rtp1Q8C8C1 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
Rtp1Q8C8C1 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtp1Q8C8C1 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtp1Q8C8C1 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC17.59■□□□□ 0.41
Rtp1Q8C8C1 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rtp1Q8C8C1 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rtp1Q8C8C1 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Rtp1Q8C8C1 Gm18187-201ENSMUST00000196476 984 ntBASIC17.59■□□□□ 0.41
Rtp1Q8C8C1 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Rtp1Q8C8C1 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC17.59■□□□□ 0.41
Rtp1Q8C8C1 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC17.59■□□□□ 0.41
Rtp1Q8C8C1 Gm6888-201ENSMUST00000221983 706 ntBASIC17.59■□□□□ 0.41
Rtp1Q8C8C1 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC17.59■□□□□ 0.41
Rtp1Q8C8C1 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC17.59■□□□□ 0.41
Rtp1Q8C8C1 Gm10154-201ENSMUST00000084445 354 ntBASIC17.59■□□□□ 0.41
Rtp1Q8C8C1 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtp1Q8C8C1 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtp1Q8C8C1 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtp1Q8C8C1 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.59■□□□□ 0.41
Rtp1Q8C8C1 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtp1Q8C8C1 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtp1Q8C8C1 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtp1Q8C8C1 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtp1Q8C8C1 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtp1Q8C8C1 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rtp1Q8C8C1 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rtp1Q8C8C1 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.58■□□□□ 0.41
Rtp1Q8C8C1 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Rtp1Q8C8C1 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rtp1Q8C8C1 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rtp1Q8C8C1 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rtp1Q8C8C1 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Rtp1Q8C8C1 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Rtp1Q8C8C1 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rtp1Q8C8C1 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rtp1Q8C8C1 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms