Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC19.75■□□□□ 0.75
Ccdc60Q8C4J0 Gm9449-201ENSMUST00000207265 1011 ntBASIC19.75■□□□□ 0.75
Ccdc60Q8C4J0 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC19.75■□□□□ 0.75
Ccdc60Q8C4J0 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc60Q8C4J0 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc60Q8C4J0 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC19.75■□□□□ 0.75
Ccdc60Q8C4J0 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Ccdc60Q8C4J0 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc60Q8C4J0 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc60Q8C4J0 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc60Q8C4J0 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc60Q8C4J0 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc60Q8C4J0 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc60Q8C4J0 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc60Q8C4J0 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc60Q8C4J0 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc60Q8C4J0 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc60Q8C4J0 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc60Q8C4J0 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc60Q8C4J0 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Ccdc60Q8C4J0 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc60Q8C4J0 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC19.74■□□□□ 0.75
Ccdc60Q8C4J0 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc60Q8C4J0 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc60Q8C4J0 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc60Q8C4J0 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc60Q8C4J0 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc60Q8C4J0 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Ccdc60Q8C4J0 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc60Q8C4J0 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc60Q8C4J0 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc60Q8C4J0 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc60Q8C4J0 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc60Q8C4J0 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Ccdc60Q8C4J0 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Ccdc60Q8C4J0 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc60Q8C4J0 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc60Q8C4J0 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc60Q8C4J0 Gm11185-201ENSMUST00000117732 1007 ntBASIC19.73■□□□□ 0.75
Ccdc60Q8C4J0 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc60Q8C4J0 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC19.73■□□□□ 0.75
Ccdc60Q8C4J0 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC19.73■□□□□ 0.75
Ccdc60Q8C4J0 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC19.73■□□□□ 0.75
Ccdc60Q8C4J0 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
Ccdc60Q8C4J0 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc60Q8C4J0 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc60Q8C4J0 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc60Q8C4J0 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc60Q8C4J0 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc60Q8C4J0 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Ccdc60Q8C4J0 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC19.73■□□□□ 0.75
Ccdc60Q8C4J0 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc60Q8C4J0 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc60Q8C4J0 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc60Q8C4J0 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Ccdc60Q8C4J0 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc60Q8C4J0 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc60Q8C4J0 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc60Q8C4J0 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc60Q8C4J0 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc60Q8C4J0 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc60Q8C4J0 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc60Q8C4J0 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc60Q8C4J0 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc60Q8C4J0 Gm2651-201ENSMUST00000203560 838 ntBASIC19.72■□□□□ 0.75
Ccdc60Q8C4J0 AV026068-213ENSMUST00000223675 1171 ntBASIC19.72■□□□□ 0.75
Ccdc60Q8C4J0 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc60Q8C4J0 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc60Q8C4J0 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc60Q8C4J0 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC19.72■□□□□ 0.75
Ccdc60Q8C4J0 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Ccdc60Q8C4J0 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Ccdc60Q8C4J0 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc60Q8C4J0 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc60Q8C4J0 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc60Q8C4J0 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc60Q8C4J0 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc60Q8C4J0 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc60Q8C4J0 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc60Q8C4J0 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc60Q8C4J0 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc60Q8C4J0 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
Ccdc60Q8C4J0 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc60Q8C4J0 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC19.71■□□□□ 0.75
Ccdc60Q8C4J0 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC19.71■□□□□ 0.75
Ccdc60Q8C4J0 Gm37153-201ENSMUST00000193637 231 ntBASIC19.71■□□□□ 0.75
Ccdc60Q8C4J0 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc60Q8C4J0 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC19.71■□□□□ 0.75
Ccdc60Q8C4J0 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc60Q8C4J0 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc60Q8C4J0 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC19.71■□□□□ 0.75
Ccdc60Q8C4J0 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc60Q8C4J0 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc60Q8C4J0 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc60Q8C4J0 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc60Q8C4J0 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC19.7■□□□□ 0.74
Ccdc60Q8C4J0 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Ccdc60Q8C4J0 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc60Q8C4J0 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc60Q8C4J0 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms