Protein–RNA interactions for Protein: Q8C0Y0

Ppp4r4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, mousemouse

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp4r4Q8C0Y0 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ppp4r4Q8C0Y0 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ppp4r4Q8C0Y0 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ppp4r4Q8C0Y0 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.67■□□□□ 0.1
Ppp4r4Q8C0Y0 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ppp4r4Q8C0Y0 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ppp4r4Q8C0Y0 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ppp4r4Q8C0Y0 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ppp4r4Q8C0Y0 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ppp4r4Q8C0Y0 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ppp4r4Q8C0Y0 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.67■□□□□ 0.1
Ppp4r4Q8C0Y0 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.67■□□□□ 0.1
Ppp4r4Q8C0Y0 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ppp4r4Q8C0Y0 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.67■□□□□ 0.1
Ppp4r4Q8C0Y0 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ppp4r4Q8C0Y0 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Ppp4r4Q8C0Y0 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ppp4r4Q8C0Y0 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Ppp4r4Q8C0Y0 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ppp4r4Q8C0Y0 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.67■□□□□ 0.1
Ppp4r4Q8C0Y0 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ppp4r4Q8C0Y0 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Ppp4r4Q8C0Y0 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ppp4r4Q8C0Y0 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ppp4r4Q8C0Y0 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ppp4r4Q8C0Y0 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ppp4r4Q8C0Y0 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ppp4r4Q8C0Y0 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.67■□□□□ 0.1
Ppp4r4Q8C0Y0 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ppp4r4Q8C0Y0 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ppp4r4Q8C0Y0 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ppp4r4Q8C0Y0 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ppp4r4Q8C0Y0 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ppp4r4Q8C0Y0 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ppp4r4Q8C0Y0 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ppp4r4Q8C0Y0 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ppp4r4Q8C0Y0 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ppp4r4Q8C0Y0 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ppp4r4Q8C0Y0 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
Ppp4r4Q8C0Y0 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ppp4r4Q8C0Y0 Gm4459-201ENSMUST00000118750 468 ntBASIC15.66■□□□□ 0.1
Ppp4r4Q8C0Y0 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ppp4r4Q8C0Y0 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ppp4r4Q8C0Y0 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ppp4r4Q8C0Y0 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.66■□□□□ 0.1
Ppp4r4Q8C0Y0 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.66■□□□□ 0.1
Ppp4r4Q8C0Y0 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ppp4r4Q8C0Y0 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC15.66■□□□□ 0.1
Ppp4r4Q8C0Y0 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.66■□□□□ 0.1
Ppp4r4Q8C0Y0 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ppp4r4Q8C0Y0 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Ppp4r4Q8C0Y0 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ppp4r4Q8C0Y0 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ppp4r4Q8C0Y0 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ppp4r4Q8C0Y0 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ppp4r4Q8C0Y0 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ppp4r4Q8C0Y0 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ppp4r4Q8C0Y0 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ppp4r4Q8C0Y0 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ppp4r4Q8C0Y0 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ppp4r4Q8C0Y0 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ppp4r4Q8C0Y0 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ppp4r4Q8C0Y0 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ppp4r4Q8C0Y0 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ppp4r4Q8C0Y0 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ppp4r4Q8C0Y0 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ppp4r4Q8C0Y0 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ppp4r4Q8C0Y0 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ppp4r4Q8C0Y0 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ppp4r4Q8C0Y0 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ppp4r4Q8C0Y0 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.65■□□□□ 0.1
Ppp4r4Q8C0Y0 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.65■□□□□ 0.1
Ppp4r4Q8C0Y0 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Ppp4r4Q8C0Y0 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Ppp4r4Q8C0Y0 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ppp4r4Q8C0Y0 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ppp4r4Q8C0Y0 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ppp4r4Q8C0Y0 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ppp4r4Q8C0Y0 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ppp4r4Q8C0Y0 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
Ppp4r4Q8C0Y0 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ppp4r4Q8C0Y0 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ppp4r4Q8C0Y0 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ppp4r4Q8C0Y0 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.65■□□□□ 0.1
Ppp4r4Q8C0Y0 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ppp4r4Q8C0Y0 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Ppp4r4Q8C0Y0 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.65■□□□□ 0.1
Ppp4r4Q8C0Y0 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ppp4r4Q8C0Y0 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ppp4r4Q8C0Y0 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ppp4r4Q8C0Y0 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ppp4r4Q8C0Y0 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ppp4r4Q8C0Y0 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ppp4r4Q8C0Y0 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ppp4r4Q8C0Y0 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Ppp4r4Q8C0Y0 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ppp4r4Q8C0Y0 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ppp4r4Q8C0Y0 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.64■□□□□ 0.09
Ppp4r4Q8C0Y0 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ppp4r4Q8C0Y0 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms