Protein–RNA interactions for Protein: Q8C0Q4

Nek11, Serine/threonine-protein kinase Nek11, mousemouse

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek11Q8C0Q4 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nek11Q8C0Q4 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nek11Q8C0Q4 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nek11Q8C0Q4 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC18.34■□□□□ 0.53
Nek11Q8C0Q4 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nek11Q8C0Q4 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Nek11Q8C0Q4 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nek11Q8C0Q4 AC157650.3-201ENSMUST00000225058 1476 ntBASIC18.33■□□□□ 0.53
Nek11Q8C0Q4 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Nek11Q8C0Q4 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nek11Q8C0Q4 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nek11Q8C0Q4 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nek11Q8C0Q4 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nek11Q8C0Q4 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Nek11Q8C0Q4 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nek11Q8C0Q4 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Nek11Q8C0Q4 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nek11Q8C0Q4 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC18.33■□□□□ 0.52
Nek11Q8C0Q4 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC18.33■□□□□ 0.52
Nek11Q8C0Q4 Mir5131-201ENSMUST00000175426 93 ntBASIC18.33■□□□□ 0.52
Nek11Q8C0Q4 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC18.33■□□□□ 0.52
Nek11Q8C0Q4 Gm5253-201ENSMUST00000187104 1025 ntBASIC18.33■□□□□ 0.52
Nek11Q8C0Q4 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC18.33■□□□□ 0.52
Nek11Q8C0Q4 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nek11Q8C0Q4 Gm7461-201ENSMUST00000058918 827 ntBASIC18.33■□□□□ 0.52
Nek11Q8C0Q4 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Nek11Q8C0Q4 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Nek11Q8C0Q4 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nek11Q8C0Q4 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Nek11Q8C0Q4 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nek11Q8C0Q4 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nek11Q8C0Q4 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC18.33■□□□□ 0.52
Nek11Q8C0Q4 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nek11Q8C0Q4 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Nek11Q8C0Q4 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nek11Q8C0Q4 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Nek11Q8C0Q4 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nek11Q8C0Q4 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nek11Q8C0Q4 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Nek11Q8C0Q4 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nek11Q8C0Q4 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nek11Q8C0Q4 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nek11Q8C0Q4 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC18.32■□□□□ 0.52
Nek11Q8C0Q4 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nek11Q8C0Q4 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nek11Q8C0Q4 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nek11Q8C0Q4 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nek11Q8C0Q4 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
Nek11Q8C0Q4 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC18.32■□□□□ 0.52
Nek11Q8C0Q4 Gm9682-201ENSMUST00000197505 556 ntBASIC18.32■□□□□ 0.52
Nek11Q8C0Q4 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nek11Q8C0Q4 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Nek11Q8C0Q4 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Nek11Q8C0Q4 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nek11Q8C0Q4 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nek11Q8C0Q4 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nek11Q8C0Q4 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nek11Q8C0Q4 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nek11Q8C0Q4 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nek11Q8C0Q4 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nek11Q8C0Q4 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nek11Q8C0Q4 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nek11Q8C0Q4 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nek11Q8C0Q4 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nek11Q8C0Q4 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nek11Q8C0Q4 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nek11Q8C0Q4 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nek11Q8C0Q4 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nek11Q8C0Q4 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nek11Q8C0Q4 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nek11Q8C0Q4 AC151836.1-202ENSMUST00000226259 753 ntBASIC18.31■□□□□ 0.52
Nek11Q8C0Q4 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC18.31■□□□□ 0.52
Nek11Q8C0Q4 AC147366.1-201ENSMUST00000227671 852 ntBASIC18.31■□□□□ 0.52
Nek11Q8C0Q4 Mzt1-203ENSMUST00000227948 952 ntBASIC18.31■□□□□ 0.52
Nek11Q8C0Q4 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Nek11Q8C0Q4 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Nek11Q8C0Q4 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nek11Q8C0Q4 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nek11Q8C0Q4 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nek11Q8C0Q4 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nek11Q8C0Q4 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nek11Q8C0Q4 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nek11Q8C0Q4 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC18.31■□□□□ 0.52
Nek11Q8C0Q4 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Nek11Q8C0Q4 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nek11Q8C0Q4 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nek11Q8C0Q4 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC18.31■□□□□ 0.52
Nek11Q8C0Q4 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Nek11Q8C0Q4 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nek11Q8C0Q4 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nek11Q8C0Q4 BC037039-201ENSMUST00000192003 2205 ntBASIC18.3■□□□□ 0.52
Nek11Q8C0Q4 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nek11Q8C0Q4 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nek11Q8C0Q4 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nek11Q8C0Q4 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nek11Q8C0Q4 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Nek11Q8C0Q4 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC18.3■□□□□ 0.52
Nek11Q8C0Q4 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nek11Q8C0Q4 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Nek11Q8C0Q4 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms