Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trub1Q8C0D0 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Trub1Q8C0D0 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trub1Q8C0D0 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Trub1Q8C0D0 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trub1Q8C0D0 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trub1Q8C0D0 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.98■□□□□ 0.15
Trub1Q8C0D0 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Trub1Q8C0D0 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trub1Q8C0D0 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.98■□□□□ 0.15
Trub1Q8C0D0 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trub1Q8C0D0 Gm44357-201ENSMUST00000195897 142 ntBASIC15.98■□□□□ 0.15
Trub1Q8C0D0 Gm19658-201ENSMUST00000196231 138 ntBASIC15.98■□□□□ 0.15
Trub1Q8C0D0 Gm44367-201ENSMUST00000196836 138 ntBASIC15.98■□□□□ 0.15
Trub1Q8C0D0 Gm44350-201ENSMUST00000197197 138 ntBASIC15.98■□□□□ 0.15
Trub1Q8C0D0 Gm44390-201ENSMUST00000197533 144 ntBASIC15.98■□□□□ 0.15
Trub1Q8C0D0 Gm44313-201ENSMUST00000198018 138 ntBASIC15.98■□□□□ 0.15
Trub1Q8C0D0 Gm44486-201ENSMUST00000198508 138 ntBASIC15.98■□□□□ 0.15
Trub1Q8C0D0 Gm44314-201ENSMUST00000199263 138 ntBASIC15.98■□□□□ 0.15
Trub1Q8C0D0 Gm44394-201ENSMUST00000199558 138 ntBASIC15.98■□□□□ 0.15
Trub1Q8C0D0 Gm44484-201ENSMUST00000199873 138 ntBASIC15.98■□□□□ 0.15
Trub1Q8C0D0 Gm44466-201ENSMUST00000200264 138 ntBASIC15.98■□□□□ 0.15
Trub1Q8C0D0 Gm44359-201ENSMUST00000200671 138 ntBASIC15.98■□□□□ 0.15
Trub1Q8C0D0 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trub1Q8C0D0 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trub1Q8C0D0 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trub1Q8C0D0 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trub1Q8C0D0 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trub1Q8C0D0 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trub1Q8C0D0 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trub1Q8C0D0 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trub1Q8C0D0 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trub1Q8C0D0 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.97■□□□□ 0.15
Trub1Q8C0D0 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trub1Q8C0D0 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.97■□□□□ 0.15
Trub1Q8C0D0 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trub1Q8C0D0 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trub1Q8C0D0 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trub1Q8C0D0 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.97■□□□□ 0.15
Trub1Q8C0D0 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.97■□□□□ 0.15
Trub1Q8C0D0 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trub1Q8C0D0 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Trub1Q8C0D0 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
Trub1Q8C0D0 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trub1Q8C0D0 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.97■□□□□ 0.15
Trub1Q8C0D0 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC15.97■□□□□ 0.15
Trub1Q8C0D0 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.97■□□□□ 0.15
Trub1Q8C0D0 Gm4535-201ENSMUST00000182274 558 ntBASIC15.97■□□□□ 0.15
Trub1Q8C0D0 Gm27646-201ENSMUST00000183989 110 ntBASIC15.97■□□□□ 0.15
Trub1Q8C0D0 Gm27459-201ENSMUST00000184860 107 ntBASIC15.97■□□□□ 0.15
Trub1Q8C0D0 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.97■□□□□ 0.15
Trub1Q8C0D0 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trub1Q8C0D0 Gm10355-201ENSMUST00000097146 517 ntBASIC15.97■□□□□ 0.15
Trub1Q8C0D0 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trub1Q8C0D0 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trub1Q8C0D0 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trub1Q8C0D0 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trub1Q8C0D0 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trub1Q8C0D0 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trub1Q8C0D0 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trub1Q8C0D0 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
Trub1Q8C0D0 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trub1Q8C0D0 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trub1Q8C0D0 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trub1Q8C0D0 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trub1Q8C0D0 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trub1Q8C0D0 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trub1Q8C0D0 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trub1Q8C0D0 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trub1Q8C0D0 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trub1Q8C0D0 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Trub1Q8C0D0 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trub1Q8C0D0 Gm43347-201ENSMUST00000200226 580 ntBASIC15.96■□□□□ 0.15
Trub1Q8C0D0 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.96■□□□□ 0.15
Trub1Q8C0D0 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.96■□□□□ 0.15
Trub1Q8C0D0 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trub1Q8C0D0 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trub1Q8C0D0 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.96■□□□□ 0.15
Trub1Q8C0D0 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Trub1Q8C0D0 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trub1Q8C0D0 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.96■□□□□ 0.15
Trub1Q8C0D0 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trub1Q8C0D0 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trub1Q8C0D0 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trub1Q8C0D0 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.96■□□□□ 0.14
Trub1Q8C0D0 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trub1Q8C0D0 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trub1Q8C0D0 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trub1Q8C0D0 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trub1Q8C0D0 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trub1Q8C0D0 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trub1Q8C0D0 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trub1Q8C0D0 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trub1Q8C0D0 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15.95■□□□□ 0.14
Trub1Q8C0D0 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Trub1Q8C0D0 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.95■□□□□ 0.14
Trub1Q8C0D0 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trub1Q8C0D0 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.95■□□□□ 0.14
Trub1Q8C0D0 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.95■□□□□ 0.14
Trub1Q8C0D0 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms