Protein–RNA interactions for Protein: Q8BXS2

Tnfsfm13, Tumor necrosis factor (ligand) superfamily, membrane-bound member 13, mousemouse

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsfm13Q8BXS2 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tnfsfm13Q8BXS2 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Tnfsfm13Q8BXS2 Gm7284-201ENSMUST00000131667 944 ntBASIC13.86□□□□□ -0.19
Tnfsfm13Q8BXS2 Rprl3-201ENSMUST00000157400 290 ntBASIC13.86□□□□□ -0.19
Tnfsfm13Q8BXS2 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Tnfsfm13Q8BXS2 Gm33142-201ENSMUST00000193913 867 ntBASIC13.86□□□□□ -0.19
Tnfsfm13Q8BXS2 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Tnfsfm13Q8BXS2 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tnfsfm13Q8BXS2 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Tnfsfm13Q8BXS2 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Tnfsfm13Q8BXS2 Sybu-209ENSMUST00000228639 4113 ntBASIC13.86□□□□□ -0.19
Tnfsfm13Q8BXS2 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Tnfsfm13Q8BXS2 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tnfsfm13Q8BXS2 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Tnfsfm13Q8BXS2 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tnfsfm13Q8BXS2 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tnfsfm13Q8BXS2 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tnfsfm13Q8BXS2 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tnfsfm13Q8BXS2 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tnfsfm13Q8BXS2 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tnfsfm13Q8BXS2 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tnfsfm13Q8BXS2 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tnfsfm13Q8BXS2 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tnfsfm13Q8BXS2 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.85□□□□□ -0.19
Tnfsfm13Q8BXS2 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Tnfsfm13Q8BXS2 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Tnfsfm13Q8BXS2 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tnfsfm13Q8BXS2 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tnfsfm13Q8BXS2 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Tnfsfm13Q8BXS2 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tnfsfm13Q8BXS2 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tnfsfm13Q8BXS2 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Tnfsfm13Q8BXS2 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tnfsfm13Q8BXS2 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tnfsfm13Q8BXS2 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.85□□□□□ -0.19
Tnfsfm13Q8BXS2 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC13.85□□□□□ -0.19
Tnfsfm13Q8BXS2 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC13.85□□□□□ -0.19
Tnfsfm13Q8BXS2 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Tnfsfm13Q8BXS2 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tnfsfm13Q8BXS2 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tnfsfm13Q8BXS2 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tnfsfm13Q8BXS2 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tnfsfm13Q8BXS2 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Tnfsfm13Q8BXS2 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tnfsfm13Q8BXS2 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Tnfsfm13Q8BXS2 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tnfsfm13Q8BXS2 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Tnfsfm13Q8BXS2 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Tnfsfm13Q8BXS2 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tnfsfm13Q8BXS2 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Tnfsfm13Q8BXS2 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tnfsfm13Q8BXS2 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tnfsfm13Q8BXS2 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfsfm13Q8BXS2 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfsfm13Q8BXS2 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfsfm13Q8BXS2 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfsfm13Q8BXS2 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfsfm13Q8BXS2 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfsfm13Q8BXS2 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Tnfsfm13Q8BXS2 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfsfm13Q8BXS2 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfsfm13Q8BXS2 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfsfm13Q8BXS2 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfsfm13Q8BXS2 Mir3081-201ENSMUST00000175305 84 ntBASIC13.84□□□□□ -0.19
Tnfsfm13Q8BXS2 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfsfm13Q8BXS2 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC13.84□□□□□ -0.19
Tnfsfm13Q8BXS2 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfsfm13Q8BXS2 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfsfm13Q8BXS2 AC154471.1-201ENSMUST00000224418 436 ntBASIC13.84□□□□□ -0.19
Tnfsfm13Q8BXS2 Otx2os1-206ENSMUST00000228153 787 ntBASIC13.84□□□□□ -0.19
Tnfsfm13Q8BXS2 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfsfm13Q8BXS2 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfsfm13Q8BXS2 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfsfm13Q8BXS2 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Tnfsfm13Q8BXS2 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfsfm13Q8BXS2 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfsfm13Q8BXS2 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfsfm13Q8BXS2 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfsfm13Q8BXS2 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfsfm13Q8BXS2 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Tnfsfm13Q8BXS2 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Tnfsfm13Q8BXS2 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Tnfsfm13Q8BXS2 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Tnfsfm13Q8BXS2 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Tnfsfm13Q8BXS2 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tnfsfm13Q8BXS2 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tnfsfm13Q8BXS2 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tnfsfm13Q8BXS2 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tnfsfm13Q8BXS2 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Tnfsfm13Q8BXS2 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tnfsfm13Q8BXS2 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tnfsfm13Q8BXS2 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tnfsfm13Q8BXS2 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tnfsfm13Q8BXS2 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tnfsfm13Q8BXS2 Gm14859-201ENSMUST00000117752 357 ntBASIC13.83□□□□□ -0.2
Tnfsfm13Q8BXS2 Gm6257-201ENSMUST00000163864 910 ntBASIC13.83□□□□□ -0.2
Tnfsfm13Q8BXS2 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC13.83□□□□□ -0.2
Tnfsfm13Q8BXS2 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC13.83□□□□□ -0.2
Tnfsfm13Q8BXS2 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC13.83□□□□□ -0.2
Tnfsfm13Q8BXS2 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms