Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SprnQ8BWU1 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SprnQ8BWU1 Gm44430-201ENSMUST00000203376 995 ntBASIC13.7□□□□□ -0.22
SprnQ8BWU1 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SprnQ8BWU1 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SprnQ8BWU1 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SprnQ8BWU1 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SprnQ8BWU1 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SprnQ8BWU1 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC13.7□□□□□ -0.22
SprnQ8BWU1 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SprnQ8BWU1 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
SprnQ8BWU1 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SprnQ8BWU1 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SprnQ8BWU1 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SprnQ8BWU1 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SprnQ8BWU1 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SprnQ8BWU1 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
SprnQ8BWU1 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SprnQ8BWU1 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SprnQ8BWU1 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SprnQ8BWU1 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SprnQ8BWU1 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SprnQ8BWU1 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SprnQ8BWU1 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.69□□□□□ -0.22
SprnQ8BWU1 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.69□□□□□ -0.22
SprnQ8BWU1 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SprnQ8BWU1 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SprnQ8BWU1 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SprnQ8BWU1 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SprnQ8BWU1 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SprnQ8BWU1 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
SprnQ8BWU1 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SprnQ8BWU1 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
SprnQ8BWU1 Gm25016-201ENSMUST00000158399 131 ntBASIC13.69□□□□□ -0.22
SprnQ8BWU1 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SprnQ8BWU1 Mir1668-201ENSMUST00000184114 107 ntBASIC13.69□□□□□ -0.22
SprnQ8BWU1 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC13.69□□□□□ -0.22
SprnQ8BWU1 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SprnQ8BWU1 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SprnQ8BWU1 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SprnQ8BWU1 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SprnQ8BWU1 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SprnQ8BWU1 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SprnQ8BWU1 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.69□□□□□ -0.22
SprnQ8BWU1 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SprnQ8BWU1 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SprnQ8BWU1 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SprnQ8BWU1 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.69□□□□□ -0.22
SprnQ8BWU1 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SprnQ8BWU1 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SprnQ8BWU1 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SprnQ8BWU1 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SprnQ8BWU1 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SprnQ8BWU1 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SprnQ8BWU1 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SprnQ8BWU1 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SprnQ8BWU1 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SprnQ8BWU1 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
SprnQ8BWU1 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SprnQ8BWU1 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
SprnQ8BWU1 Gm14859-201ENSMUST00000117752 357 ntBASIC13.68□□□□□ -0.22
SprnQ8BWU1 Gm7284-201ENSMUST00000131667 944 ntBASIC13.68□□□□□ -0.22
SprnQ8BWU1 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SprnQ8BWU1 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SprnQ8BWU1 Ank2-226ENSMUST00000189368 339 ntBASIC13.68□□□□□ -0.22
SprnQ8BWU1 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC13.68□□□□□ -0.22
SprnQ8BWU1 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.68□□□□□ -0.22
SprnQ8BWU1 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SprnQ8BWU1 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SprnQ8BWU1 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SprnQ8BWU1 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
SprnQ8BWU1 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SprnQ8BWU1 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SprnQ8BWU1 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SprnQ8BWU1 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SprnQ8BWU1 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SprnQ8BWU1 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SprnQ8BWU1 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
SprnQ8BWU1 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SprnQ8BWU1 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SprnQ8BWU1 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
SprnQ8BWU1 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SprnQ8BWU1 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SprnQ8BWU1 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SprnQ8BWU1 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.68□□□□□ -0.22
SprnQ8BWU1 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
SprnQ8BWU1 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SprnQ8BWU1 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.67□□□□□ -0.22
SprnQ8BWU1 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SprnQ8BWU1 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SprnQ8BWU1 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SprnQ8BWU1 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.67□□□□□ -0.22
SprnQ8BWU1 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SprnQ8BWU1 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SprnQ8BWU1 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SprnQ8BWU1 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SprnQ8BWU1 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SprnQ8BWU1 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SprnQ8BWU1 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC13.67□□□□□ -0.22
SprnQ8BWU1 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms