Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp43Q8BUM9 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp43Q8BUM9 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp43Q8BUM9 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Usp43Q8BUM9 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp43Q8BUM9 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp43Q8BUM9 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp43Q8BUM9 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Usp43Q8BUM9 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Usp43Q8BUM9 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.69■□□□□ 0.1
Usp43Q8BUM9 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.69■□□□□ 0.1
Usp43Q8BUM9 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Usp43Q8BUM9 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp43Q8BUM9 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
Usp43Q8BUM9 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Usp43Q8BUM9 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp43Q8BUM9 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp43Q8BUM9 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.69■□□□□ 0.1
Usp43Q8BUM9 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp43Q8BUM9 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp43Q8BUM9 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp43Q8BUM9 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.68■□□□□ 0.1
Usp43Q8BUM9 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.68■□□□□ 0.1
Usp43Q8BUM9 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp43Q8BUM9 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.68■□□□□ 0.1
Usp43Q8BUM9 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp43Q8BUM9 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Usp43Q8BUM9 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp43Q8BUM9 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Usp43Q8BUM9 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Usp43Q8BUM9 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp43Q8BUM9 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.68■□□□□ 0.1
Usp43Q8BUM9 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp43Q8BUM9 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp43Q8BUM9 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp43Q8BUM9 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Usp43Q8BUM9 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp43Q8BUM9 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Usp43Q8BUM9 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp43Q8BUM9 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp43Q8BUM9 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp43Q8BUM9 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Usp43Q8BUM9 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp43Q8BUM9 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp43Q8BUM9 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp43Q8BUM9 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Usp43Q8BUM9 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.67■□□□□ 0.1
Usp43Q8BUM9 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Usp43Q8BUM9 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Usp43Q8BUM9 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC15.67■□□□□ 0.1
Usp43Q8BUM9 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.67■□□□□ 0.1
Usp43Q8BUM9 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.67■□□□□ 0.1
Usp43Q8BUM9 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp43Q8BUM9 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp43Q8BUM9 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp43Q8BUM9 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
Usp43Q8BUM9 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp43Q8BUM9 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp43Q8BUM9 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp43Q8BUM9 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Usp43Q8BUM9 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp43Q8BUM9 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp43Q8BUM9 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp43Q8BUM9 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp43Q8BUM9 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Usp43Q8BUM9 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp43Q8BUM9 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Usp43Q8BUM9 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp43Q8BUM9 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp43Q8BUM9 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp43Q8BUM9 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp43Q8BUM9 Gm25990-201ENSMUST00000102440 86 ntBASIC15.66■□□□□ 0.1
Usp43Q8BUM9 Gm7153-201ENSMUST00000117092 455 ntBASIC15.66■□□□□ 0.1
Usp43Q8BUM9 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.66■□□□□ 0.1
Usp43Q8BUM9 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Usp43Q8BUM9 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp43Q8BUM9 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.66■□□□□ 0.1
Usp43Q8BUM9 Gm6089-201ENSMUST00000197666 938 ntBASIC15.66■□□□□ 0.1
Usp43Q8BUM9 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.66■□□□□ 0.1
Usp43Q8BUM9 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Usp43Q8BUM9 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.66■□□□□ 0.1
Usp43Q8BUM9 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.66■□□□□ 0.1
Usp43Q8BUM9 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp43Q8BUM9 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Usp43Q8BUM9 Rps4l-201ENSMUST00000071745 943 ntBASIC15.66■□□□□ 0.1
Usp43Q8BUM9 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.66■□□□□ 0.1
Usp43Q8BUM9 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp43Q8BUM9 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp43Q8BUM9 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Usp43Q8BUM9 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp43Q8BUM9 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Usp43Q8BUM9 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp43Q8BUM9 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp43Q8BUM9 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Usp43Q8BUM9 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp43Q8BUM9 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp43Q8BUM9 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp43Q8BUM9 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp43Q8BUM9 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp43Q8BUM9 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms