Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.7□□□□□ -0.06
Cdk5rap1Q8BTW8 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.7□□□□□ -0.06
Cdk5rap1Q8BTW8 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdk5rap1Q8BTW8 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdk5rap1Q8BTW8 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cdk5rap1Q8BTW8 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cdk5rap1Q8BTW8 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cdk5rap1Q8BTW8 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdk5rap1Q8BTW8 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdk5rap1Q8BTW8 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdk5rap1Q8BTW8 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdk5rap1Q8BTW8 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdk5rap1Q8BTW8 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdk5rap1Q8BTW8 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Cdk5rap1Q8BTW8 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdk5rap1Q8BTW8 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdk5rap1Q8BTW8 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdk5rap1Q8BTW8 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.69□□□□□ -0.06
Cdk5rap1Q8BTW8 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.69□□□□□ -0.06
Cdk5rap1Q8BTW8 Gm14722-201ENSMUST00000118943 689 ntBASIC14.69□□□□□ -0.06
Cdk5rap1Q8BTW8 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cdk5rap1Q8BTW8 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.69□□□□□ -0.06
Cdk5rap1Q8BTW8 Mir3113-201ENSMUST00000175478 76 ntBASIC14.69□□□□□ -0.06
Cdk5rap1Q8BTW8 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.69□□□□□ -0.06
Cdk5rap1Q8BTW8 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.69□□□□□ -0.06
Cdk5rap1Q8BTW8 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdk5rap1Q8BTW8 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdk5rap1Q8BTW8 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cdk5rap1Q8BTW8 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdk5rap1Q8BTW8 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdk5rap1Q8BTW8 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
Cdk5rap1Q8BTW8 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdk5rap1Q8BTW8 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdk5rap1Q8BTW8 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdk5rap1Q8BTW8 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdk5rap1Q8BTW8 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Cdk5rap1Q8BTW8 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdk5rap1Q8BTW8 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdk5rap1Q8BTW8 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cdk5rap1Q8BTW8 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdk5rap1Q8BTW8 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdk5rap1Q8BTW8 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdk5rap1Q8BTW8 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdk5rap1Q8BTW8 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdk5rap1Q8BTW8 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdk5rap1Q8BTW8 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cdk5rap1Q8BTW8 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdk5rap1Q8BTW8 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cdk5rap1Q8BTW8 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cdk5rap1Q8BTW8 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Cdk5rap1Q8BTW8 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cdk5rap1Q8BTW8 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdk5rap1Q8BTW8 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdk5rap1Q8BTW8 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdk5rap1Q8BTW8 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdk5rap1Q8BTW8 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cdk5rap1Q8BTW8 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
Cdk5rap1Q8BTW8 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cdk5rap1Q8BTW8 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Cdk5rap1Q8BTW8 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdk5rap1Q8BTW8 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cdk5rap1Q8BTW8 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdk5rap1Q8BTW8 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdk5rap1Q8BTW8 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cdk5rap1Q8BTW8 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdk5rap1Q8BTW8 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdk5rap1Q8BTW8 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cdk5rap1Q8BTW8 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdk5rap1Q8BTW8 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdk5rap1Q8BTW8 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Cdk5rap1Q8BTW8 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdk5rap1Q8BTW8 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdk5rap1Q8BTW8 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdk5rap1Q8BTW8 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdk5rap1Q8BTW8 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.67□□□□□ -0.06
Cdk5rap1Q8BTW8 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdk5rap1Q8BTW8 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdk5rap1Q8BTW8 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdk5rap1Q8BTW8 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdk5rap1Q8BTW8 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdk5rap1Q8BTW8 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdk5rap1Q8BTW8 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdk5rap1Q8BTW8 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdk5rap1Q8BTW8 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cdk5rap1Q8BTW8 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.67□□□□□ -0.06
Cdk5rap1Q8BTW8 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdk5rap1Q8BTW8 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdk5rap1Q8BTW8 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Cdk5rap1Q8BTW8 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Cdk5rap1Q8BTW8 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.67□□□□□ -0.06
Cdk5rap1Q8BTW8 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdk5rap1Q8BTW8 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cdk5rap1Q8BTW8 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.67□□□□□ -0.06
Cdk5rap1Q8BTW8 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.67□□□□□ -0.06
Cdk5rap1Q8BTW8 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdk5rap1Q8BTW8 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdk5rap1Q8BTW8 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cdk5rap1Q8BTW8 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdk5rap1Q8BTW8 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdk5rap1Q8BTW8 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms