Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Nup54Q8BTS4 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nup54Q8BTS4 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Nup54Q8BTS4 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nup54Q8BTS4 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15.83■□□□□ 0.12
Nup54Q8BTS4 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.83■□□□□ 0.12
Nup54Q8BTS4 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Nup54Q8BTS4 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Nup54Q8BTS4 Gm43514-201ENSMUST00000198852 424 ntBASIC15.83■□□□□ 0.12
Nup54Q8BTS4 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.83■□□□□ 0.12
Nup54Q8BTS4 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nup54Q8BTS4 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nup54Q8BTS4 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nup54Q8BTS4 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.83■□□□□ 0.12
Nup54Q8BTS4 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nup54Q8BTS4 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nup54Q8BTS4 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nup54Q8BTS4 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Nup54Q8BTS4 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Nup54Q8BTS4 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Nup54Q8BTS4 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.83■□□□□ 0.12
Nup54Q8BTS4 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.83■□□□□ 0.12
Nup54Q8BTS4 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nup54Q8BTS4 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.82■□□□□ 0.12
Nup54Q8BTS4 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.82■□□□□ 0.12
Nup54Q8BTS4 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nup54Q8BTS4 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nup54Q8BTS4 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nup54Q8BTS4 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nup54Q8BTS4 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nup54Q8BTS4 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.82■□□□□ 0.12
Nup54Q8BTS4 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nup54Q8BTS4 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nup54Q8BTS4 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nup54Q8BTS4 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.82■□□□□ 0.12
Nup54Q8BTS4 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nup54Q8BTS4 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nup54Q8BTS4 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nup54Q8BTS4 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nup54Q8BTS4 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC15.82■□□□□ 0.12
Nup54Q8BTS4 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.82■□□□□ 0.12
Nup54Q8BTS4 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nup54Q8BTS4 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.82■□□□□ 0.12
Nup54Q8BTS4 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nup54Q8BTS4 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.82■□□□□ 0.12
Nup54Q8BTS4 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nup54Q8BTS4 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nup54Q8BTS4 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Nup54Q8BTS4 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nup54Q8BTS4 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nup54Q8BTS4 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nup54Q8BTS4 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nup54Q8BTS4 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nup54Q8BTS4 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nup54Q8BTS4 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nup54Q8BTS4 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nup54Q8BTS4 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nup54Q8BTS4 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nup54Q8BTS4 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nup54Q8BTS4 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nup54Q8BTS4 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nup54Q8BTS4 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Nup54Q8BTS4 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Nup54Q8BTS4 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Nup54Q8BTS4 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Nup54Q8BTS4 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Nup54Q8BTS4 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.81■□□□□ 0.12
Nup54Q8BTS4 Gm14140-201ENSMUST00000119999 995 ntBASIC15.81■□□□□ 0.12
Nup54Q8BTS4 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Nup54Q8BTS4 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.81■□□□□ 0.12
Nup54Q8BTS4 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Nup54Q8BTS4 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nup54Q8BTS4 Gm27525-201ENSMUST00000184465 107 ntBASIC15.81■□□□□ 0.12
Nup54Q8BTS4 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nup54Q8BTS4 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nup54Q8BTS4 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.81■□□□□ 0.12
Nup54Q8BTS4 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nup54Q8BTS4 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.81■□□□□ 0.12
Nup54Q8BTS4 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.81■□□□□ 0.12
Nup54Q8BTS4 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
Nup54Q8BTS4 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nup54Q8BTS4 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nup54Q8BTS4 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nup54Q8BTS4 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nup54Q8BTS4 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nup54Q8BTS4 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nup54Q8BTS4 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Nup54Q8BTS4 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.8■□□□□ 0.12
Nup54Q8BTS4 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nup54Q8BTS4 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Nup54Q8BTS4 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nup54Q8BTS4 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Nup54Q8BTS4 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.8■□□□□ 0.12
Nup54Q8BTS4 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nup54Q8BTS4 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nup54Q8BTS4 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nup54Q8BTS4 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.8■□□□□ 0.12
Nup54Q8BTS4 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15.8■□□□□ 0.12
Nup54Q8BTS4 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Nup54Q8BTS4 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms