Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Cpsf4Q8BQZ5 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cpsf4Q8BQZ5 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.06■□□□□ 0
Cpsf4Q8BQZ5 Gm15165-201ENSMUST00000118140 502 ntBASIC15.06■□□□□ 0
Cpsf4Q8BQZ5 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cpsf4Q8BQZ5 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.06■□□□□ 0
Cpsf4Q8BQZ5 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.06■□□□□ 0
Cpsf4Q8BQZ5 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.06■□□□□ 0
Cpsf4Q8BQZ5 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.06■□□□□ 0
Cpsf4Q8BQZ5 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cpsf4Q8BQZ5 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cpsf4Q8BQZ5 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Cpsf4Q8BQZ5 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cpsf4Q8BQZ5 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cpsf4Q8BQZ5 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cpsf4Q8BQZ5 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.06■□□□□ 0
Cpsf4Q8BQZ5 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Cpsf4Q8BQZ5 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Cpsf4Q8BQZ5 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.06■□□□□ 0
Cpsf4Q8BQZ5 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.06■□□□□ 0
Cpsf4Q8BQZ5 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cpsf4Q8BQZ5 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Cpsf4Q8BQZ5 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Cpsf4Q8BQZ5 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cpsf4Q8BQZ5 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.05■□□□□ 0
Cpsf4Q8BQZ5 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cpsf4Q8BQZ5 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.05■□□□□ 0
Cpsf4Q8BQZ5 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cpsf4Q8BQZ5 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cpsf4Q8BQZ5 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cpsf4Q8BQZ5 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cpsf4Q8BQZ5 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cpsf4Q8BQZ5 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Cpsf4Q8BQZ5 Gm12644-201ENSMUST00000119935 606 ntBASIC15.05■□□□□ -0
Cpsf4Q8BQZ5 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC15.05■□□□□ -0
Cpsf4Q8BQZ5 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.05■□□□□ -0
Cpsf4Q8BQZ5 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC15.05■□□□□ -0
Cpsf4Q8BQZ5 Gm43347-201ENSMUST00000200226 580 ntBASIC15.05■□□□□ -0
Cpsf4Q8BQZ5 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cpsf4Q8BQZ5 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cpsf4Q8BQZ5 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cpsf4Q8BQZ5 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cpsf4Q8BQZ5 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Cpsf4Q8BQZ5 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.05■□□□□ -0
Cpsf4Q8BQZ5 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.05■□□□□ -0
Cpsf4Q8BQZ5 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cpsf4Q8BQZ5 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cpsf4Q8BQZ5 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cpsf4Q8BQZ5 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.05■□□□□ -0
Cpsf4Q8BQZ5 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cpsf4Q8BQZ5 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cpsf4Q8BQZ5 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Cpsf4Q8BQZ5 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cpsf4Q8BQZ5 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cpsf4Q8BQZ5 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cpsf4Q8BQZ5 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Cpsf4Q8BQZ5 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cpsf4Q8BQZ5 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cpsf4Q8BQZ5 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.04■□□□□ -0
Cpsf4Q8BQZ5 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.04■□□□□ -0
Cpsf4Q8BQZ5 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Cpsf4Q8BQZ5 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cpsf4Q8BQZ5 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Cpsf4Q8BQZ5 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.04■□□□□ -0
Cpsf4Q8BQZ5 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.04■□□□□ -0
Cpsf4Q8BQZ5 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cpsf4Q8BQZ5 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.04■□□□□ -0
Cpsf4Q8BQZ5 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cpsf4Q8BQZ5 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.04■□□□□ -0
Cpsf4Q8BQZ5 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cpsf4Q8BQZ5 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
Cpsf4Q8BQZ5 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cpsf4Q8BQZ5 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.04■□□□□ -0
Cpsf4Q8BQZ5 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.04■□□□□ -0
Cpsf4Q8BQZ5 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.04■□□□□ -0
Cpsf4Q8BQZ5 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cpsf4Q8BQZ5 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Cpsf4Q8BQZ5 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cpsf4Q8BQZ5 Gm7461-201ENSMUST00000058918 827 ntBASIC15.04■□□□□ -0
Cpsf4Q8BQZ5 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cpsf4Q8BQZ5 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cpsf4Q8BQZ5 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Cpsf4Q8BQZ5 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Cpsf4Q8BQZ5 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Cpsf4Q8BQZ5 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Cpsf4Q8BQZ5 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cpsf4Q8BQZ5 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cpsf4Q8BQZ5 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cpsf4Q8BQZ5 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cpsf4Q8BQZ5 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Cpsf4Q8BQZ5 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cpsf4Q8BQZ5 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cpsf4Q8BQZ5 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cpsf4Q8BQZ5 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cpsf4Q8BQZ5 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cpsf4Q8BQZ5 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Cpsf4Q8BQZ5 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Cpsf4Q8BQZ5 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.03■□□□□ -0
Cpsf4Q8BQZ5 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.03■□□□□ -0
Cpsf4Q8BQZ5 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms