Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rab11fip4Q8BQP8 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rab11fip4Q8BQP8 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rab11fip4Q8BQP8 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rab11fip4Q8BQP8 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Rab11fip4Q8BQP8 Gm10355-201ENSMUST00000097146 517 ntBASIC17.17■□□□□ 0.34
Rab11fip4Q8BQP8 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rab11fip4Q8BQP8 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rab11fip4Q8BQP8 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rab11fip4Q8BQP8 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rab11fip4Q8BQP8 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rab11fip4Q8BQP8 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rab11fip4Q8BQP8 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.16■□□□□ 0.34
Rab11fip4Q8BQP8 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rab11fip4Q8BQP8 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Rab11fip4Q8BQP8 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rab11fip4Q8BQP8 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rab11fip4Q8BQP8 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rab11fip4Q8BQP8 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC17.16■□□□□ 0.34
Rab11fip4Q8BQP8 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rab11fip4Q8BQP8 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Rab11fip4Q8BQP8 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rab11fip4Q8BQP8 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rab11fip4Q8BQP8 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rab11fip4Q8BQP8 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Rab11fip4Q8BQP8 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rab11fip4Q8BQP8 Gm1401-201ENSMUST00000122048 772 ntBASIC17.16■□□□□ 0.34
Rab11fip4Q8BQP8 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC17.16■□□□□ 0.34
Rab11fip4Q8BQP8 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rab11fip4Q8BQP8 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rab11fip4Q8BQP8 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.16■□□□□ 0.34
Rab11fip4Q8BQP8 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.16■□□□□ 0.34
Rab11fip4Q8BQP8 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC17.16■□□□□ 0.34
Rab11fip4Q8BQP8 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rab11fip4Q8BQP8 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Rab11fip4Q8BQP8 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.16■□□□□ 0.34
Rab11fip4Q8BQP8 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rab11fip4Q8BQP8 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rab11fip4Q8BQP8 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rab11fip4Q8BQP8 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rab11fip4Q8BQP8 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rab11fip4Q8BQP8 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rab11fip4Q8BQP8 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rab11fip4Q8BQP8 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rab11fip4Q8BQP8 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rab11fip4Q8BQP8 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rab11fip4Q8BQP8 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rab11fip4Q8BQP8 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rab11fip4Q8BQP8 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rab11fip4Q8BQP8 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rab11fip4Q8BQP8 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rab11fip4Q8BQP8 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rab11fip4Q8BQP8 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Rab11fip4Q8BQP8 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rab11fip4Q8BQP8 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.15■□□□□ 0.34
Rab11fip4Q8BQP8 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rab11fip4Q8BQP8 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.15■□□□□ 0.34
Rab11fip4Q8BQP8 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC17.15■□□□□ 0.34
Rab11fip4Q8BQP8 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC17.15■□□□□ 0.34
Rab11fip4Q8BQP8 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rab11fip4Q8BQP8 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Rab11fip4Q8BQP8 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rab11fip4Q8BQP8 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rab11fip4Q8BQP8 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Rab11fip4Q8BQP8 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rab11fip4Q8BQP8 Gm44616-201ENSMUST00000206417 1732 ntBASIC17.15■□□□□ 0.34
Rab11fip4Q8BQP8 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rab11fip4Q8BQP8 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rab11fip4Q8BQP8 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.15■□□□□ 0.34
Rab11fip4Q8BQP8 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rab11fip4Q8BQP8 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rab11fip4Q8BQP8 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rab11fip4Q8BQP8 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC17.14■□□□□ 0.33
Rab11fip4Q8BQP8 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.14■□□□□ 0.33
Rab11fip4Q8BQP8 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rab11fip4Q8BQP8 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rab11fip4Q8BQP8 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rab11fip4Q8BQP8 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rab11fip4Q8BQP8 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rab11fip4Q8BQP8 Gm13418-201ENSMUST00000119097 944 ntBASIC17.14■□□□□ 0.33
Rab11fip4Q8BQP8 Gm12497-201ENSMUST00000138778 237 ntBASIC17.14■□□□□ 0.33
Rab11fip4Q8BQP8 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC17.14■□□□□ 0.33
Rab11fip4Q8BQP8 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rab11fip4Q8BQP8 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rab11fip4Q8BQP8 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rab11fip4Q8BQP8 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Rab11fip4Q8BQP8 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rab11fip4Q8BQP8 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rab11fip4Q8BQP8 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rab11fip4Q8BQP8 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC17.14■□□□□ 0.33
Rab11fip4Q8BQP8 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rab11fip4Q8BQP8 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rab11fip4Q8BQP8 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Rab11fip4Q8BQP8 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.14■□□□□ 0.33
Rab11fip4Q8BQP8 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rab11fip4Q8BQP8 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rab11fip4Q8BQP8 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Rab11fip4Q8BQP8 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rab11fip4Q8BQP8 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rab11fip4Q8BQP8 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms