Protein–RNA interactions for Protein: Q8BK63

Csnk1a1, Casein kinase I isoform alpha, mousemouse

Known RBP Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csnk1a1Q8BK63 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.8□□□□□ -0.2
Csnk1a1Q8BK63 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Csnk1a1Q8BK63 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Csnk1a1Q8BK63 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Csnk1a1Q8BK63 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Csnk1a1Q8BK63 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Csnk1a1Q8BK63 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Csnk1a1Q8BK63 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Csnk1a1Q8BK63 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Csnk1a1Q8BK63 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Csnk1a1Q8BK63 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Csnk1a1Q8BK63 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.79□□□□□ -0.2
Csnk1a1Q8BK63 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Csnk1a1Q8BK63 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Csnk1a1Q8BK63 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC13.79□□□□□ -0.2
Csnk1a1Q8BK63 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Csnk1a1Q8BK63 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Csnk1a1Q8BK63 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC13.79□□□□□ -0.2
Csnk1a1Q8BK63 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Csnk1a1Q8BK63 AC160338.1-201ENSMUST00000214232 705 ntBASIC13.79□□□□□ -0.2
Csnk1a1Q8BK63 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Csnk1a1Q8BK63 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Csnk1a1Q8BK63 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Csnk1a1Q8BK63 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Csnk1a1Q8BK63 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Csnk1a1Q8BK63 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Csnk1a1Q8BK63 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Csnk1a1Q8BK63 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Csnk1a1Q8BK63 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Csnk1a1Q8BK63 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Csnk1a1Q8BK63 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Csnk1a1Q8BK63 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Csnk1a1Q8BK63 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Csnk1a1Q8BK63 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Csnk1a1Q8BK63 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Csnk1a1Q8BK63 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Csnk1a1Q8BK63 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Csnk1a1Q8BK63 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Csnk1a1Q8BK63 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.78□□□□□ -0.2
Csnk1a1Q8BK63 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Csnk1a1Q8BK63 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Csnk1a1Q8BK63 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Csnk1a1Q8BK63 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Csnk1a1Q8BK63 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Csnk1a1Q8BK63 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Csnk1a1Q8BK63 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Csnk1a1Q8BK63 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Csnk1a1Q8BK63 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Csnk1a1Q8BK63 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Csnk1a1Q8BK63 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Csnk1a1Q8BK63 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Csnk1a1Q8BK63 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Csnk1a1Q8BK63 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Csnk1a1Q8BK63 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC13.78□□□□□ -0.2
Csnk1a1Q8BK63 Gm43347-201ENSMUST00000200226 580 ntBASIC13.78□□□□□ -0.2
Csnk1a1Q8BK63 Gm13830-205ENSMUST00000201195 1155 ntBASIC13.78□□□□□ -0.2
Csnk1a1Q8BK63 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC13.78□□□□□ -0.2
Csnk1a1Q8BK63 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Csnk1a1Q8BK63 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC13.78□□□□□ -0.2
Csnk1a1Q8BK63 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Csnk1a1Q8BK63 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Csnk1a1Q8BK63 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Csnk1a1Q8BK63 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Csnk1a1Q8BK63 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Csnk1a1Q8BK63 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Csnk1a1Q8BK63 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Csnk1a1Q8BK63 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Csnk1a1Q8BK63 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Csnk1a1Q8BK63 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Csnk1a1Q8BK63 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Csnk1a1Q8BK63 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Csnk1a1Q8BK63 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Csnk1a1Q8BK63 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Csnk1a1Q8BK63 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Csnk1a1Q8BK63 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Csnk1a1Q8BK63 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Csnk1a1Q8BK63 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Csnk1a1Q8BK63 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Csnk1a1Q8BK63 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC13.77□□□□□ -0.21
Csnk1a1Q8BK63 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC13.77□□□□□ -0.21
Csnk1a1Q8BK63 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Csnk1a1Q8BK63 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Csnk1a1Q8BK63 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.21
Csnk1a1Q8BK63 Rbfox2-207ENSMUST00000227533 1041 ntBASIC13.77□□□□□ -0.21
Csnk1a1Q8BK63 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Csnk1a1Q8BK63 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Csnk1a1Q8BK63 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Csnk1a1Q8BK63 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Csnk1a1Q8BK63 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Csnk1a1Q8BK63 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Csnk1a1Q8BK63 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.77□□□□□ -0.21
Csnk1a1Q8BK63 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Csnk1a1Q8BK63 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Csnk1a1Q8BK63 Gm16011-201ENSMUST00000121567 2662 ntBASIC13.77□□□□□ -0.21
Csnk1a1Q8BK63 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Csnk1a1Q8BK63 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Csnk1a1Q8BK63 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Csnk1a1Q8BK63 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Csnk1a1Q8BK63 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Csnk1a1Q8BK63 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms