Protein–RNA interactions for Protein: Q8BGV9

Atg4d, Cysteine protease ATG4D, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4dQ8BGV9 Gm4899-201ENSMUST00000178708 719 ntBASIC14.42□□□□□ -0.1
Atg4dQ8BGV9 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.42□□□□□ -0.1
Atg4dQ8BGV9 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Atg4dQ8BGV9 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Atg4dQ8BGV9 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.42□□□□□ -0.1
Atg4dQ8BGV9 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.42□□□□□ -0.1
Atg4dQ8BGV9 Gm7787-201ENSMUST00000216858 688 ntBASIC14.42□□□□□ -0.1
Atg4dQ8BGV9 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Atg4dQ8BGV9 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atg4dQ8BGV9 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Atg4dQ8BGV9 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atg4dQ8BGV9 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atg4dQ8BGV9 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Atg4dQ8BGV9 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.42□□□□□ -0.1
Atg4dQ8BGV9 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.42□□□□□ -0.1
Atg4dQ8BGV9 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atg4dQ8BGV9 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atg4dQ8BGV9 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atg4dQ8BGV9 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Atg4dQ8BGV9 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atg4dQ8BGV9 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atg4dQ8BGV9 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atg4dQ8BGV9 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atg4dQ8BGV9 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atg4dQ8BGV9 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atg4dQ8BGV9 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atg4dQ8BGV9 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atg4dQ8BGV9 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atg4dQ8BGV9 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.41□□□□□ -0.1
Atg4dQ8BGV9 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atg4dQ8BGV9 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.41□□□□□ -0.1
Atg4dQ8BGV9 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Atg4dQ8BGV9 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Atg4dQ8BGV9 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.41□□□□□ -0.1
Atg4dQ8BGV9 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atg4dQ8BGV9 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Atg4dQ8BGV9 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.41□□□□□ -0.1
Atg4dQ8BGV9 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Atg4dQ8BGV9 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atg4dQ8BGV9 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atg4dQ8BGV9 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atg4dQ8BGV9 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Atg4dQ8BGV9 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Atg4dQ8BGV9 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atg4dQ8BGV9 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atg4dQ8BGV9 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.41□□□□□ -0.1
Atg4dQ8BGV9 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atg4dQ8BGV9 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atg4dQ8BGV9 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Atg4dQ8BGV9 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atg4dQ8BGV9 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atg4dQ8BGV9 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atg4dQ8BGV9 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atg4dQ8BGV9 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atg4dQ8BGV9 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atg4dQ8BGV9 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atg4dQ8BGV9 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Atg4dQ8BGV9 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atg4dQ8BGV9 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atg4dQ8BGV9 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.4□□□□□ -0.1
Atg4dQ8BGV9 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Atg4dQ8BGV9 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.4□□□□□ -0.1
Atg4dQ8BGV9 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Atg4dQ8BGV9 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.4□□□□□ -0.1
Atg4dQ8BGV9 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Atg4dQ8BGV9 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Atg4dQ8BGV9 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atg4dQ8BGV9 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.4□□□□□ -0.1
Atg4dQ8BGV9 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atg4dQ8BGV9 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atg4dQ8BGV9 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.4□□□□□ -0.1
Atg4dQ8BGV9 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atg4dQ8BGV9 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atg4dQ8BGV9 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atg4dQ8BGV9 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atg4dQ8BGV9 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atg4dQ8BGV9 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Atg4dQ8BGV9 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atg4dQ8BGV9 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atg4dQ8BGV9 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atg4dQ8BGV9 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Atg4dQ8BGV9 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atg4dQ8BGV9 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.39□□□□□ -0.11
Atg4dQ8BGV9 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atg4dQ8BGV9 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.39□□□□□ -0.11
Atg4dQ8BGV9 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atg4dQ8BGV9 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Atg4dQ8BGV9 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atg4dQ8BGV9 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atg4dQ8BGV9 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Atg4dQ8BGV9 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atg4dQ8BGV9 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atg4dQ8BGV9 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atg4dQ8BGV9 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atg4dQ8BGV9 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.38□□□□□ -0.11
Atg4dQ8BGV9 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atg4dQ8BGV9 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Atg4dQ8BGV9 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Atg4dQ8BGV9 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.38□□□□□ -0.11
Atg4dQ8BGV9 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms