Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trnp1Q80ZI1 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trnp1Q80ZI1 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trnp1Q80ZI1 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.38■□□□□ 0.37
Trnp1Q80ZI1 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trnp1Q80ZI1 Syt7-204ENSMUST00000223586 1344 ntBASIC17.38■□□□□ 0.37
Trnp1Q80ZI1 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.38■□□□□ 0.37
Trnp1Q80ZI1 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC17.38■□□□□ 0.37
Trnp1Q80ZI1 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trnp1Q80ZI1 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trnp1Q80ZI1 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Trnp1Q80ZI1 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trnp1Q80ZI1 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trnp1Q80ZI1 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trnp1Q80ZI1 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Trnp1Q80ZI1 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Trnp1Q80ZI1 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trnp1Q80ZI1 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC17.37■□□□□ 0.37
Trnp1Q80ZI1 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trnp1Q80ZI1 Gm18766-201ENSMUST00000189811 808 ntBASIC17.37■□□□□ 0.37
Trnp1Q80ZI1 Gm9794-201ENSMUST00000202370 423 ntBASIC17.37■□□□□ 0.37
Trnp1Q80ZI1 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trnp1Q80ZI1 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trnp1Q80ZI1 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trnp1Q80ZI1 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trnp1Q80ZI1 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC17.37■□□□□ 0.37
Trnp1Q80ZI1 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trnp1Q80ZI1 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trnp1Q80ZI1 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Trnp1Q80ZI1 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trnp1Q80ZI1 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trnp1Q80ZI1 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC17.37■□□□□ 0.37
Trnp1Q80ZI1 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trnp1Q80ZI1 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trnp1Q80ZI1 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trnp1Q80ZI1 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trnp1Q80ZI1 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trnp1Q80ZI1 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC17.36■□□□□ 0.37
Trnp1Q80ZI1 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trnp1Q80ZI1 Gm27838-201ENSMUST00000184829 128 ntBASIC17.36■□□□□ 0.37
Trnp1Q80ZI1 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Trnp1Q80ZI1 Gm7775-201ENSMUST00000218871 853 ntBASIC17.36■□□□□ 0.37
Trnp1Q80ZI1 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC17.36■□□□□ 0.37
Trnp1Q80ZI1 AC124732.1-201ENSMUST00000221551 910 ntBASIC17.36■□□□□ 0.37
Trnp1Q80ZI1 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trnp1Q80ZI1 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Trnp1Q80ZI1 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trnp1Q80ZI1 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Trnp1Q80ZI1 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Trnp1Q80ZI1 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Trnp1Q80ZI1 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trnp1Q80ZI1 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trnp1Q80ZI1 Gm8096-201ENSMUST00000209921 1591 ntBASIC17.36■□□□□ 0.37
Trnp1Q80ZI1 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trnp1Q80ZI1 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trnp1Q80ZI1 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC17.36■□□□□ 0.37
Trnp1Q80ZI1 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trnp1Q80ZI1 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trnp1Q80ZI1 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trnp1Q80ZI1 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trnp1Q80ZI1 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Trnp1Q80ZI1 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trnp1Q80ZI1 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trnp1Q80ZI1 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.35■□□□□ 0.37
Trnp1Q80ZI1 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trnp1Q80ZI1 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC17.35■□□□□ 0.37
Trnp1Q80ZI1 Gm12490-201ENSMUST00000120255 560 ntBASIC17.35■□□□□ 0.37
Trnp1Q80ZI1 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trnp1Q80ZI1 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trnp1Q80ZI1 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trnp1Q80ZI1 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC17.35■□□□□ 0.37
Trnp1Q80ZI1 CT010506.4-201ENSMUST00000225457 351 ntBASIC17.35■□□□□ 0.37
Trnp1Q80ZI1 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trnp1Q80ZI1 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trnp1Q80ZI1 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trnp1Q80ZI1 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trnp1Q80ZI1 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trnp1Q80ZI1 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC17.35■□□□□ 0.37
Trnp1Q80ZI1 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trnp1Q80ZI1 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trnp1Q80ZI1 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Trnp1Q80ZI1 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Trnp1Q80ZI1 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trnp1Q80ZI1 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trnp1Q80ZI1 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trnp1Q80ZI1 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trnp1Q80ZI1 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Trnp1Q80ZI1 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Trnp1Q80ZI1 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trnp1Q80ZI1 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Trnp1Q80ZI1 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC17.34■□□□□ 0.37
Trnp1Q80ZI1 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Trnp1Q80ZI1 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.34■□□□□ 0.37
Trnp1Q80ZI1 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trnp1Q80ZI1 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trnp1Q80ZI1 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC17.34■□□□□ 0.37
Trnp1Q80ZI1 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC17.34■□□□□ 0.37
Trnp1Q80ZI1 Gm3365-201ENSMUST00000216296 1480 ntBASIC17.34■□□□□ 0.37
Trnp1Q80ZI1 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trnp1Q80ZI1 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms