Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh8Q7TSK3 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh8Q7TSK3 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh8Q7TSK3 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh8Q7TSK3 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh8Q7TSK3 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.29■□□□□ 0.04
Pcdh8Q7TSK3 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh8Q7TSK3 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Pcdh8Q7TSK3 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh8Q7TSK3 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh8Q7TSK3 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.28■□□□□ 0.04
Pcdh8Q7TSK3 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Pcdh8Q7TSK3 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh8Q7TSK3 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh8Q7TSK3 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh8Q7TSK3 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh8Q7TSK3 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh8Q7TSK3 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh8Q7TSK3 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.28■□□□□ 0.04
Pcdh8Q7TSK3 Gm6736-201ENSMUST00000166583 948 ntBASIC15.28■□□□□ 0.04
Pcdh8Q7TSK3 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh8Q7TSK3 Gm45683-201ENSMUST00000210825 1247 ntBASIC15.28■□□□□ 0.04
Pcdh8Q7TSK3 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.28■□□□□ 0.04
Pcdh8Q7TSK3 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Pcdh8Q7TSK3 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh8Q7TSK3 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh8Q7TSK3 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh8Q7TSK3 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.28■□□□□ 0.04
Pcdh8Q7TSK3 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh8Q7TSK3 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh8Q7TSK3 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh8Q7TSK3 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.27■□□□□ 0.04
Pcdh8Q7TSK3 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh8Q7TSK3 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh8Q7TSK3 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh8Q7TSK3 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Pcdh8Q7TSK3 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
Pcdh8Q7TSK3 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh8Q7TSK3 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh8Q7TSK3 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh8Q7TSK3 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh8Q7TSK3 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh8Q7TSK3 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Pcdh8Q7TSK3 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh8Q7TSK3 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.27■□□□□ 0.04
Pcdh8Q7TSK3 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh8Q7TSK3 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Pcdh8Q7TSK3 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC15.27■□□□□ 0.04
Pcdh8Q7TSK3 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh8Q7TSK3 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Pcdh8Q7TSK3 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh8Q7TSK3 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh8Q7TSK3 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh8Q7TSK3 Gm27702-201ENSMUST00000184512 56 ntBASIC15.27■□□□□ 0.04
Pcdh8Q7TSK3 Gm37153-201ENSMUST00000193637 231 ntBASIC15.27■□□□□ 0.04
Pcdh8Q7TSK3 Gm19164-201ENSMUST00000210667 640 ntBASIC15.27■□□□□ 0.04
Pcdh8Q7TSK3 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh8Q7TSK3 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh8Q7TSK3 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh8Q7TSK3 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh8Q7TSK3 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh8Q7TSK3 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh8Q7TSK3 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh8Q7TSK3 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Pcdh8Q7TSK3 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh8Q7TSK3 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh8Q7TSK3 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh8Q7TSK3 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh8Q7TSK3 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh8Q7TSK3 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh8Q7TSK3 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.26■□□□□ 0.03
Pcdh8Q7TSK3 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh8Q7TSK3 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh8Q7TSK3 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Pcdh8Q7TSK3 Gm15358-201ENSMUST00000119249 520 ntBASIC15.26■□□□□ 0.03
Pcdh8Q7TSK3 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC15.26■□□□□ 0.03
Pcdh8Q7TSK3 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh8Q7TSK3 Gm45167-201ENSMUST00000208007 322 ntBASIC15.26■□□□□ 0.03
Pcdh8Q7TSK3 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh8Q7TSK3 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh8Q7TSK3 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh8Q7TSK3 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh8Q7TSK3 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh8Q7TSK3 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.26■□□□□ 0.03
Pcdh8Q7TSK3 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Pcdh8Q7TSK3 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh8Q7TSK3 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh8Q7TSK3 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.25■□□□□ 0.03
Pcdh8Q7TSK3 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh8Q7TSK3 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh8Q7TSK3 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.25■□□□□ 0.03
Pcdh8Q7TSK3 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh8Q7TSK3 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh8Q7TSK3 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Pcdh8Q7TSK3 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh8Q7TSK3 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh8Q7TSK3 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Pcdh8Q7TSK3 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh8Q7TSK3 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh8Q7TSK3 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms